| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1613 |
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| Symbol | |
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| ID | 8530008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1752564 |
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| End bp | 1754162 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003259010 |
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| Protein GI | 261820904 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAAT ACAAAGGATT GCCGAAGGGG GGGCAGAGGA GCAAAAGCAG TGAAGAGTCG
GGGCAGATAT CCCTGTTTGA TCTGGCATTG ACTCTGACTG CACAGAACAC TGAGGCTGAG
CTGTGTGACT GGCTTTTGTC CATGATGGCA TCTTATTGGC GGCCCCAGGG GGCGATACTT
GGATTAGTTG ATGGCAGCGG CAGGCAACTC TTGTGTCAAG GTCAGGCGGC AGATGAACTC
GTTGTGATGG CACTTGATGT GGATGATTTC AGTCATCCAT TGGCCTATGC CCTGCATGAG
AGCAAAGCTC ATGTCTGGCC ATCGTTGAAT GGTGGTGCGC GTATTGAGCA CTTGGCCTTT
CAACAGATGC TGTCGGGGCT GGGAGCTGCG TGTGGGCTGT ATGCCATACC GATGTTATCG
GATAGCGGCA CCGTGTTGGG AACACTGGCG CTGCTGGATA CACCAGAGCG TTTACAACAA
TGGCATGACA GTGGAGAAGG CAGAAAGCTG GTTCAGATAT TCTGCAACCA ACTGGTGCTT
TTTCGCCAGC GATCGGGAGG GCTGCATCAG CAGTCAATGC TCAGTGCTTC TGTCAAACGA
GCTCGGGATG AGGTGTGTCA GCAGGTACTG ATAAAACGCA TACAGGGTGC ACTGATCGGT
CAGTCGTCAT ATATGAGGGC GTTGCAACAG AAAATCGGAC AAGCGGCTGA GCATACTTTG
TCAGTATTGA TCTTGGGTGA AACGGGTACA GGCAAGGATG TGGTGGCCCG CCTGTTGCAT
CAGTGTTCCG CTAGGGGAGA TGCGCCCTTT GTGGCGATTA ACTGTGCCGC GATCCCCGAG
AATCTGATCG AAAGTGAGTT GTTTGGCTAC CGGAAAGGGG CGTTTTCTGA TGCTCTGAGC
GACAAGGTTG GTCTGGTGGC GCAGGCCCAT GGCGGCACGC TGTTTTTGGA CGAGATCGGA
GATATGCCGC TTGCCATGCA GGCCAAGTTA TTGCGGGTGC TGGAGACCAA GTGTTTTCGC
CCTCTCGGCG CAGAGCAGGA AGTACATTCG GATTTCCGGC TAATTGCCGC CACGCATCAT
TTGTTGAAAA AGCGCATATC AGACGGTGCG TTTCGCCAGG ATCTGTACCA CCGACTATGC
CAGTGTGTAT TGCATGTAGC GCCACTGCGC GAACGTGTAG AGGATATTCC GCTGCTGTGC
CGTCACTTCA CCGCACTCTG TTGCAGACGG GAGCAGAAAG CACCCGTGAC GCTGGAGCAG
TCATTCCTGC GTCAGTTAAT GCAGTATGCC TTTCCTGGCA ATGTGCGGGA ACTGCGCAAC
CTTCTGGAGA TTGCTTGTGC TCACACCTCA TCCGGCCAGC AGATCACCAT GCAGTCATTG
CCGCCCGAAG CGCAGAAACG GCTGACAAGT GAACTGGCTC AGGGAGAGGA TTTTCAGCAC
ATAGCGGATT TGCGCCTCGC AGTACGTGTA CGGGAGGCCG CCATCCTGCA AGCGAGGCTA
CGGCAGTTCG GTGGCGATCG TCAGGCTGCT GCAGACAGCC TGAATATACC CAAGCGTACG
TTCAATCGTA AATGTCTCAG TCAGGGAATC AGGTATTGA
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| Protein sequence | MYEYKGLPKG GQRSKSSEES GQISLFDLAL TLTAQNTEAE LCDWLLSMMA SYWRPQGAIL
GLVDGSGRQL LCQGQAADEL VVMALDVDDF SHPLAYALHE SKAHVWPSLN GGARIEHLAF
QQMLSGLGAA CGLYAIPMLS DSGTVLGTLA LLDTPERLQQ WHDSGEGRKL VQIFCNQLVL
FRQRSGGLHQ QSMLSASVKR ARDEVCQQVL IKRIQGALIG QSSYMRALQQ KIGQAAEHTL
SVLILGETGT GKDVVARLLH QCSARGDAPF VAINCAAIPE NLIESELFGY RKGAFSDALS
DKVGLVAQAH GGTLFLDEIG DMPLAMQAKL LRVLETKCFR PLGAEQEVHS DFRLIAATHH
LLKKRISDGA FRQDLYHRLC QCVLHVAPLR ERVEDIPLLC RHFTALCCRR EQKAPVTLEQ
SFLRQLMQYA FPGNVRELRN LLEIACAHTS SGQQITMQSL PPEAQKRLTS ELAQGEDFQH
IADLRLAVRV REAAILQARL RQFGGDRQAA ADSLNIPKRT FNRKCLSQGI RY
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