Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1600 |
Symbol | |
ID | 8529995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1734359 |
End bp | 1737952 |
Gene Length | 3594 bp |
Protein Length | 1197 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003258997 |
Protein GI | 261820891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.616777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATTT TATTGAACAA ATTTTTGAAA CGGTCATTCG CCATGCTTGA AACGTCAGAA GAAATCATTG AAGCCATCCG TGCCGCAACT GCTACCGGAT TTCGTGGCCG ACTTCTTGCT CGGGGCCAAG CCCGGGCTAT GATCTGGCGT GATGGTAAGT TACCTGAGGA TGCGCCAGAA TTTACTCCTC AGCTCAGTGA AGACCTTCAA GGTTATGCTT ACTCATTGAT TAGCCTTGGG CTTGGTCTTC GGAATCTGAA CGGAGATGCC TACTACTCGC GACTGGCATT TGAGTATGCG GCGACCGCTC TTGAATCAGT AATTGCGAAA GGTGCTCGGG AAAGTTATGA CAATAATTTT CACTTTGTCA TGGCTGCCGC TAGCTATCAC TTGGCTCACC TCTCTGCCCG CGCTTATTCA TTACTCGCGA TGGTTGGCGA TAATGACAAT TTCTCCCCTA TCGAACACGT CCTAACGAAG CTCATCCGGC GAAATTTTCA TACCCTGCGA TCCAGCGTTC TCAGCTATCG AGTGCGTGGG GAGGGGAGTG AGGAGCGAAT TATTGATGAC ATGCGTGCAA ATGTTGACCC GCAGGTCGAA GGAGGGGCTG AAGACGATAG AGAGAATAAT CTCGCTGAAG CAGAATACAA CGCTTTGTTT GAGGGGCTGG ATACTGCGTT GACCGATACC TATATGACCG CGATGTCCCT CTATATTCTT GCTATCGAAA GAGGTGATCG CCTCTACCTG ACCAGGGCTA TCGAGCAGCT CCAGTCAGGC TTGGCAGTCT GCTCGCGCTT TAATATGCTT CCTCAATGGT GGGTCATTTT TATTACCATC CATCTGCTGT CAGACCTCTG GTCTGATACG TTCCATGAAC TGCTGCCACT CGACACGGCT GGCAATGAAG CTGAAGCATG GCCCGAACTT CGTGAGTTGT TCATCGCATT ACTCCATCAA CGTCCCCGTG CGGAAGTCGA CCTCTGGCCA TCACAGAGAG AAGCTGCGGT GCGTGCAGTA AACGATGCGG ATGACTTAGT GGTCTCCCTG CCCACCAGCG CAGGTAAAAC GCGAATAGCT GAGCTATGCA TACTCCGTTG TCTGGCGGGA GGAAAACGGG TTGTTTTTAT TACTCCACTT CGCGCGCTTT CCGCACAGAC AGAAGCCACA CTATCCAGAA CGTTCAATCC CCTTGGAAAG ACGATCTCTG CGCTCTATGG CAGCATCGGC GTCAGTGGAA TGGATGAGGA CGCCATTCGC CTGCGCGATA TCGTGGTGGC TACACCTGAA AAGCTTGATT TTGCACTGCG CAATGATCCG GGTCTAATCA ATGATGTTGG GCTATTCATT TTTGATGAGG GACACATGAT CGGGGCCGAT GAGCGCGAGG TCCGTTACGA GGTCCAGATC CAGCGACTGT TACGCCGCTC CGATGCTAAT GAACGCAGAA TCGTTTGTCT ATCGGCCATT CTGCCTGATG GCAATCAGCT TGATGATTTT GCCAACTGGC TACGGCGTGA CAAACCTGGC GGCGTCGTCA GGAACGACTG GCGGCCCACC AGCCTGCGTT TTGGAGAGGT AATTTGGGCT GGTGCAGCCG CCAGACTCAA CCTTAGCGTA GGGGAAGAAC GGCCATGGGT TTCACGATTC CTAGTCTCTG CCGAACCGCC TGTGGTTAAA CTGAGGGGAA GGAAACAGCG TAAAAAACTC TTCCCCGGTA CGTCTAATGA ACTCTGTTTA GCAACAGCGT GGCGACTTGT CGAGGATGGA CAGACCGTGC TGATTTATTG CCCGCTTCGC AAAAGCGTGG AACCCTTTGC TGACACAATA GTTGATCTTA ACCAACGGGG ATTACTGCGC TCTTTGTTCG AAGGGGAAGC GGATGTACTT GATCGGGCTA TTGCGCTTGG AGAAGAGTGG CTTGGCGCTC AGAGCCCAAT ACTCACCTGC CTTCGTCTGG GGGTGGCGCT CCATCATGGC GCGCTGCCTA CGGCTTATCG AAAAGAAATC GAGCGCCTGC TCCGCGATGG CGTGCTGAAA GTGACTGTTT CTTCACCTAC GCTTGCGCAG GGGCTCAATC TTTCTGCCAC GGTGATAGTA ATGCATTCGC TGCACAGGAA TGGTGAACTC ATCAATGTTT CCGAATTCAG AAATGTTATC GGCCGTGCTG GACGTGCCTA TGTTGACGTA GAAGGGCTGG TTATTTACCC CATCTTTGAC GAGGTCGGTA AACGCCTAGG AAACTGGAAT AAGCTGACCA AGGACACCGG TGCCAGAGAG ATGCAAAGCG GCTTGGTCCA GCTTGTTATT TCCTTACTGA CACGAATGAG CCTGCAAGTA AGTGGTGATA TTGACACGCT CACTGACTAT GTTCTGAACA ACGCGAGAGC GTGGACATTC CCTATCAAAA CCGGGGAAAA CGCTAATGAA AGGGAGAGAG CCTTTACTCT CTGGGAAAAG CAAATCGCCA CCTTGGATAC GGCTATCCTC AGCCTGATTG GCGAGAGTGA TGTTCCAGAC GATCAGATTG AAGACACTCT TGATGACATT TTGCATTCCT CGTTGTGGCA AAGAAGCCTT CAACGTTACC CGGGTGATAA CATTCGCGGG TTGATCAAAT CCGGGCTGTT ATCTCGCAGT CATCATATTT GGCAAAACTC AACGCCAGCC GCCCGTCGGG GTTACTTTCT CTCGGGGGTA GGACTGAAAA CCGGCCAGCA ACTCGATTCC ATCGCGCCGG AGGCGAACCG TCTCTTAATT GAGGCTAACG CCGCCATCAT GCGGAGTGAT GAAGAAGGGG CGATAGCCGC CCTTACGGCC TTAGCAAGTC GGGTCTTTAC TTTTTATCCT TTTACACCAG ACCCCCTTCC CGATGACTGG CAGGCGATAC TGCATGCTTG GCTATCCGGC AAACCTACTA CTGCAATCGC CGACGTCGTG AAAACGGAAA TTTTGCAGTT TGTGGAGAAT GGCCTTACCT ATCGCCTTCC CTGGGCGATG GAAGCTATCC GGGTGCGAGC CATCGCGAAT GGCGACATCG TGGATGACGA AGGATTGACG TTGGATGCTT TTGAACTTGG TCCGGCGGTT GCGGCAGTTG AAACTGGCAC GCTGAACCGA GCGGCGTCAC TGCTGATTCA GGCTGGATTC AACTCAAGGC TTGCTGCAAT TAAGGCTGTA AAGGACTCCG ACGCCGATTT CATTTCAGGC CGGGGACTTC GTGAGTGGTT AAGATCCGAC CTTATCGTTG CTTGGGGCGA GCTTCCAGAC TGGCCGACTC CAGAAACTCA CAGGATGTGG ATTGATTTTA CACGAGTAAC AAACCCTGCT GACGATCAGA CATGGAGCCT TCGTCGGTAT ACTGGTACAG TAAAATGGAT TGGCGCAATA CCTCAACCGC TAACACCACT TCATTTCTAT CAGTTGGATG GGGTCAATTA TCTGCTCGCA GAAGACGGCA GGCCACTTGC CAGCATTACA GGTGCGATCA ATACAAAAAG GAAGGGGCTG ATGCGGGTTA CAGTGGGAAA CCAATCGAAC ATAGAGGTGG ACTACCTGGG GCCTGACGAT ATTGCGGCCC AAAGAGAGGG CTGA
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Protein sequence | MVILLNKFLK RSFAMLETSE EIIEAIRAAT ATGFRGRLLA RGQARAMIWR DGKLPEDAPE FTPQLSEDLQ GYAYSLISLG LGLRNLNGDA YYSRLAFEYA ATALESVIAK GARESYDNNF HFVMAAASYH LAHLSARAYS LLAMVGDNDN FSPIEHVLTK LIRRNFHTLR SSVLSYRVRG EGSEERIIDD MRANVDPQVE GGAEDDRENN LAEAEYNALF EGLDTALTDT YMTAMSLYIL AIERGDRLYL TRAIEQLQSG LAVCSRFNML PQWWVIFITI HLLSDLWSDT FHELLPLDTA GNEAEAWPEL RELFIALLHQ RPRAEVDLWP SQREAAVRAV NDADDLVVSL PTSAGKTRIA ELCILRCLAG GKRVVFITPL RALSAQTEAT LSRTFNPLGK TISALYGSIG VSGMDEDAIR LRDIVVATPE KLDFALRNDP GLINDVGLFI FDEGHMIGAD EREVRYEVQI QRLLRRSDAN ERRIVCLSAI LPDGNQLDDF ANWLRRDKPG GVVRNDWRPT SLRFGEVIWA GAAARLNLSV GEERPWVSRF LVSAEPPVVK LRGRKQRKKL FPGTSNELCL ATAWRLVEDG QTVLIYCPLR KSVEPFADTI VDLNQRGLLR SLFEGEADVL DRAIALGEEW LGAQSPILTC LRLGVALHHG ALPTAYRKEI ERLLRDGVLK VTVSSPTLAQ GLNLSATVIV MHSLHRNGEL INVSEFRNVI GRAGRAYVDV EGLVIYPIFD EVGKRLGNWN KLTKDTGARE MQSGLVQLVI SLLTRMSLQV SGDIDTLTDY VLNNARAWTF PIKTGENANE RERAFTLWEK QIATLDTAIL SLIGESDVPD DQIEDTLDDI LHSSLWQRSL QRYPGDNIRG LIKSGLLSRS HHIWQNSTPA ARRGYFLSGV GLKTGQQLDS IAPEANRLLI EANAAIMRSD EEGAIAALTA LASRVFTFYP FTPDPLPDDW QAILHAWLSG KPTTAIADVV KTEILQFVEN GLTYRLPWAM EAIRVRAIAN GDIVDDEGLT LDAFELGPAV AAVETGTLNR AASLLIQAGF NSRLAAIKAV KDSDADFISG RGLREWLRSD LIVAWGELPD WPTPETHRMW IDFTRVTNPA DDQTWSLRRY TGTVKWIGAI PQPLTPLHFY QLDGVNYLLA EDGRPLASIT GAINTKRKGL MRVTVGNQSN IEVDYLGPDD IAAQREG
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