| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1557 |
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| Symbol | |
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| ID | 8529947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1694481 |
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| End bp | 1695968 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003258959 |
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| Protein GI | 261820853 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.275301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCC TCCATCCCCT TACCTTGGTT GTAGCCGCTA GCTTAATGGC GGGTTGTGCG
GTTGGACCGG ATTATCATCG CCCGGACGCT CCGCTGTCGG ATCGTTATCA GGCGCAATCT
GTCGCAAAAC AATCTGCTGC GCAACAATCC ATCGAAAAAC AAGGAAACGC AATCCAGTCG
ACCAACATTG CGGTCTGGTG GGAGGGCTTC AATGATCCCT TACTGAGTGA GCTAGTTTCA
AGCGCACTCT CACAGAATCT TGATTTAGCC CAGGCGTCTG CGCGGGTGAT CCAGTCACGC
GCCGGGCTTG GTGCGGCAAC TGCGGCTCTG CTGCCATCGG GCAGCATCAG CGGACAAGGT
GCCCGCGCCT ATCAGTCTGT TGAAACGCCA CAAGGCCGGC TACTCAACTC GACTTCTGGC
TATAATCGCT ACGGGAATGC CTATGAAACC GACCTTAACG CAAGCTGGGA ACTTGATATA
TTCGGCGGTC TGAGGCGCGA TCGTCAGGCG GCACTGGCTG ACTATCAGGC TTCAGAGGCT
GGCGTCACGG CCACTCGTCT AGCCGTCGCC GCGCAGACTG CCGATATCTA TATTACTCTG
CGCGGATTAC AAGCTCGCCT GGAGATCGCC AATAGACAGG TCAATACCCA GCAAGAACTG
CGGGACAAAG TACAGCTACT CCACAGCAAA GGGCTCGCCG CAGAGTATCA AGTCCGTCAG
GCCGAGGGCA CGCTTTCACA GGTTCAGGCA ACCGTGCCGG TTCTTCAGAC CGGGATAGAT
AGCGCGATGA ACGCGCTGGA CGTCATGCTC GGCACGCCTC CCGGAACCCA TCGCACTCAG
TTGGCTTCTC CGGGTGCCAT TCCACAGCCC CCACAGTTCA TACCAACGGG TACACCTGCC
GATCTGCTAC GTCGCAGACC TGACATTATC GTAGCCGAAC GCCATCTCGC GGCATCCAAC
GCACGTATCG GGGTCGCCAT CAGCGAGTAC TATCCTAAAT TCTCACTCAG CGCATTACTC
GGTAGTACAA CGTCAGTATC GAGCGGCAAT CTGTTCTCCA ACGGCGCTAG CCAATCGGCG
GGTGTATTGG GGTTACGCTG GCGGCTATTC GATTTCGGCC GTATTAACGC TCAGATCGAT
CAGGCTAAGG GGCAGGAAGC CGAAGCATTG GCAGCTTACC GCCTGTCAGT ATTAAGCGCG
ACCGAAGACG TTGAGAACGC GTTCTCGGCA CTGCTCAATC GCGAGACGCA GACAACAACA
TTAACCGCAG GCGAAACTGC GTTGGCTAGC GCACGCCAGT CATCTTTCAT CGCTTACCAG
AAAGGGACAG CCAGTCTGAT TGACGTCCTG CACAACGATG AAACCCTGTT GCAGATTTCC
GACGCCAGAG CGCAGGCCCA GACGGAATCT GCACGCGCAA CTGTCGCCGC ATTCAAAGCT
CTCGGTGGCG GCTGGCAGCC TCCAGAAGCC ACCAAGAGGA TGCCCTAA
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| Protein sequence | MSSLHPLTLV VAASLMAGCA VGPDYHRPDA PLSDRYQAQS VAKQSAAQQS IEKQGNAIQS
TNIAVWWEGF NDPLLSELVS SALSQNLDLA QASARVIQSR AGLGAATAAL LPSGSISGQG
ARAYQSVETP QGRLLNSTSG YNRYGNAYET DLNASWELDI FGGLRRDRQA ALADYQASEA
GVTATRLAVA AQTADIYITL RGLQARLEIA NRQVNTQQEL RDKVQLLHSK GLAAEYQVRQ
AEGTLSQVQA TVPVLQTGID SAMNALDVML GTPPGTHRTQ LASPGAIPQP PQFIPTGTPA
DLLRRRPDII VAERHLAASN ARIGVAISEY YPKFSLSALL GSTTSVSSGN LFSNGASQSA
GVLGLRWRLF DFGRINAQID QAKGQEAEAL AAYRLSVLSA TEDVENAFSA LLNRETQTTT
LTAGETALAS ARQSSFIAYQ KGTASLIDVL HNDETLLQIS DARAQAQTES ARATVAAFKA
LGGGWQPPEA TKRMP
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