| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1546 |
|---|
| Symbol | |
|---|
| ID | 8529936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1684089 |
|---|
| End bp | 1684922 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_003258949 |
|---|
| Protein GI | 261820843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.746626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAA CACAATCAAT ATTGGCGCAG GGGCAGCGGC GTCAGCCCGT ACTCGGTGGT
GAAATCTGGC TGGTGGGTGC AGGGCCGGGT GATGCGGAAC TGCTGACGCT GAAGGCGCTG
CGGGCAATCC AGCAGGCGGA TGTGGTGGTT TATGATCGGC TGGTGTCGGC GGAGATTATG
GATCTGGTAC CAGAACAGGC GCTGTGCATC GACGTGGGTA AAACGCGCGG CTGTCATCGA
CTGTCACAGG AAAAAATCAA TCAATTGTTA GTCGAGTTGG CACAAGCTGG ACAGCGGGTG
ATCCGTCTCA AGGGCGGCGA TCCGTTCATC TTTGGGCGCG GCGGTGAAGA GATGAACTAT
GCCCAGCAGG CGGGAATTGT CTGCCATGTG GTGCCGGGTA TTACCGCCGC GACAGGCTGT
GCAGCGGCAG TGGGACTACC GCTAACGCAC CGTGCCTGCG CACAGTCGGT GCGTTTGGTC
ACCGGTCATT CGTGCGACGG CGAACCACAA CTGGACTGGC CGACGTTGGC GGACAGCCAG
CAAACGTTGG TGTTTTATAT GGGGTTGAGC CACAGCAGTC GGCTGTGCCA GCGCTTGATC
GAACACGGGC TGCCAGCACA GACACCAGTT GCGATTATTG AACGCGGTAC CCAGCCCGAT
CAGCGGTTGT TGACCGCTAC GCTAGCGACT CTACCAGCAT TACTGGCGCG CTATCAGCCA
CAGTCGCCCA GTCTGCTGGT GGTTGGTGAT GTCGTCCGCT TCTGTCGCCA TCCAGCGCTG
GGTGTTGACG CGATTCCCGC ACGGCTGACG ATGGAAAAAG ATGAAGCCGC CTGA
|
|---|
| Protein sequence | MMTTQSILAQ GQRRQPVLGG EIWLVGAGPG DAELLTLKAL RAIQQADVVV YDRLVSAEIM
DLVPEQALCI DVGKTRGCHR LSQEKINQLL VELAQAGQRV IRLKGGDPFI FGRGGEEMNY
AQQAGIVCHV VPGITAATGC AAAVGLPLTH RACAQSVRLV TGHSCDGEPQ LDWPTLADSQ
QTLVFYMGLS HSSRLCQRLI EHGLPAQTPV AIIERGTQPD QRLLTATLAT LPALLARYQP
QSPSLLVVGD VVRFCRHPAL GVDAIPARLT MEKDEAA
|
|---|
| |