| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1255 |
|---|
| Symbol | |
|---|
| ID | 8529644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1368888 |
|---|
| End bp | 1370090 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ribosomal RNA large subunit methyltransferase N |
|---|
| Protein accession | YP_003258676 |
|---|
| Protein GI | 261820570 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.450874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAGC AAATCGTGTC TGAGTCTGAA ACTATCGTGT CTGAATTCTC CCCGGCATCT
GCTGATGCTT CTCAATCCGT TAAAACCTGT GCGGAAAAAA TCAACCTGCT TGATCTTAAC
CGTCAGCAAA TGCGCGAGCT TTTCATGTCT ATGGGGGAAA AGCCGTTCCG CGCCGATCAG
GTCATGAAGT GGATCTATCA CTACTGCTGT GATGACTTCA ACCAGATGAC GGATATCAAC
AAAGTTTTCC GTTCCAAATT GCAGGAAATC GCTGAGATTC GCGCACCTGA AGTGGTGGAT
GAACAACGCT CTTCCGACGG CACGATTAAG TGGGCGATTC TGGTGGGCGG CCAGCGGGTT
GAAACGGTTT ATATTCCAGA AGAAGATCGT GCCACGCTAT GCGTATCGTC TCAGGTCGGC
TGTGCGCTGG AGTGTAAATT CTGCTCAACG GCGCAGCAGG GCTTTAACCG TAACCTGCGC
GTATCGGAAA TCATCGGCCA GGTGTGGCGC GCGGCGAAGA TCATCGGTGC CTTTAAAGTC
ACTGGTCAGC GTCCGATCAC CAACGTGGTA ATGATGGGGA TGGGCGAACC GCTGCTGAAC
CTGACTAATG TGGTGCCAGC GATGGAAATT ATGCTGGATG ACTTCGGCTT TGGTTTGTCT
AAGCGCCGTG TGACGCTGTC TACGTCAGGC GTGGTGCCCG CACTGGATAA ACTGGGCGAT
ATGATTGATG TTGCGCTGGC GATTTCACTG CATGCGCCGA CAGACGATAT CCGTAATGAA
ATCATGCCGA TCAACAAAAA ATACAATATC GAGATGTTTC TGAGCGCGGT GCGTCGTTAT
CTGGAGAAAT CCAATGCGAA TCAGGGACGC GTTACGGTTG AGTATGTGAT GCTGGATCAT
ATCAATGACG GCACCGAGCA TGCGCATCAA CTGGCTGAAT GCCTGAAAGA TACGCCGTGC
AAGATCAACC TGATTCCATG GAACCCGTTC CCGGGTGCGC CGTATGGCCG CAGCTCAAAC
AGCCGCGTTG ACCGTTTCTC CAAAGTGCTG ATGGAATATG GTTTCACAAC GATCGTACGT
AAAACGCGTG GGGATGACAT TGATGCTGCC TGCGGTCAGT TGGCGGGGGA AGTCGTGGAT
AGAACCAAGC GCACGTTGAA GAAGAAAATG GCCGGTGAAC CTATCGCGGT GAAAGCGGTC
TGA
|
|---|
| Protein sequence | MSKQIVSESE TIVSEFSPAS ADASQSVKTC AEKINLLDLN RQQMRELFMS MGEKPFRADQ
VMKWIYHYCC DDFNQMTDIN KVFRSKLQEI AEIRAPEVVD EQRSSDGTIK WAILVGGQRV
ETVYIPEEDR ATLCVSSQVG CALECKFCST AQQGFNRNLR VSEIIGQVWR AAKIIGAFKV
TGQRPITNVV MMGMGEPLLN LTNVVPAMEI MLDDFGFGLS KRRVTLSTSG VVPALDKLGD
MIDVALAISL HAPTDDIRNE IMPINKKYNI EMFLSAVRRY LEKSNANQGR VTVEYVMLDH
INDGTEHAHQ LAECLKDTPC KINLIPWNPF PGAPYGRSSN SRVDRFSKVL MEYGFTTIVR
KTRGDDIDAA CGQLAGEVVD RTKRTLKKKM AGEPIAVKAV
|
|---|
| |