| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1212 |
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| Symbol | |
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| ID | 8529601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1310766 |
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| End bp | 1312127 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_003258633 |
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| Protein GI | 261820527 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTCG GTAAATATAT CAAACGAATC AAACAGTATT TTGTAGGTGG GGATGAAGAA
AACCTGCAAA CCATGCCAGA AGTGAGTCGA GCAATGATGG AGGATTCGCC ACGCTCTATT
CGCTTCACGC TGTGGGCTAT TGGTGCTTTT TTCCTGTTTT TCATTCTGTG GGCCGGGCTG
GCAAATATTG ATGAAGTCAC ACGGGGCGAT GGGAAAGCGA TCCCTTCTTC CCGGCTGCAA
AAAATCCAAA ACCTGGAAGG TGGCATTATC ACGGAAGTGT TCATTCGTGA AGGTCAGATC
GTCAATGCAG GCGATCCTTT GTTGCGCCTT GATGATACGC GTTTTGCTTC TAACGTGGGT
GAAACCGAAG CCGATAGGCT TGCCCTCCTG TCGCGAATTG AACGCCTAAA CGCCGAAATC
AGCGGTCAGA CATTGGTGCT TTCCGAAGAG ATTACGACGC AAGCGCCTAA AGTCGCAGCA
GGAGAAAAAG AGCTTTATAA CAGCCGCCGC CAGCAACTTT ATAATGAGGT ATCTGGTCTG
GAAGAGCAGT TGATCCAACG TCGCCAGGAA CTGCGGGATT TTTCCGCCAA GGAGATTCAA
TTCCGCAATA GCCTAGGCCT TCTTCAGCAA GAAATTAAAA TGTCGGAGCC GTTGATTGCA
GAAGGTGCGA TTTCTAAAGT AGAAGTTTTG CGCCTACGCC GTGCTGAGGT CGAAACCCGT
GGCCAACTTG ATTCCATCAA ACTCTCTATT CCCCGAGCGG AATCTGCAGT TAAAGAGAGT
GAAAATAAAA TAGAGGAGAC ACGCAGCCGC TATAAAAGCG AAGCGTTATC CCAACTCAGT
GAAGCACAAA CTAATCTGAA TAAAATTGAA GCCACGGGTA AAGCACTCGA AGACCGGGTA
AACCGAACGC TGGTTGTCTC CCCTGTTCGC GGTATTGTGC AGCAGGTTCT GGTGAATACC
ATCGGGGGTG TGATTCAACC AGGTAGCGAT CTGGTGGAAA TTGTGCCACT GGATGACAAA
TTGCTGGTAG AAGCTAAAAT TCGCCCTCAG GATATTGCCT TTTTACATCC TGGTCAGGGT
GCCATAATAA AATTGACGGC CTATGACTAT ACTATCTATG GCGGTTTAAC AGGTCAGTTG
GAGCAAATCA GCCCAGATAC GGTAACGGAT AAAGAAGGGA ACAGCTTTTA TATTATTCGT
TTGCGGACTG ATAAAAATTA TTTGGGCTCA GCCGATAAAC CTCTTCTTAT CATTCCCGGC
ATGGTGGCCT CTGTAGATAT AATAACGGGA AAGAAAACTA TCCTCAGTTA TTTGTTAAAA
CCAATCATTC GGGCAAAAGC AGAAGCACTA CGAGAAAGAT AA
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| Protein sequence | MRLGKYIKRI KQYFVGGDEE NLQTMPEVSR AMMEDSPRSI RFTLWAIGAF FLFFILWAGL
ANIDEVTRGD GKAIPSSRLQ KIQNLEGGII TEVFIREGQI VNAGDPLLRL DDTRFASNVG
ETEADRLALL SRIERLNAEI SGQTLVLSEE ITTQAPKVAA GEKELYNSRR QQLYNEVSGL
EEQLIQRRQE LRDFSAKEIQ FRNSLGLLQQ EIKMSEPLIA EGAISKVEVL RLRRAEVETR
GQLDSIKLSI PRAESAVKES ENKIEETRSR YKSEALSQLS EAQTNLNKIE ATGKALEDRV
NRTLVVSPVR GIVQQVLVNT IGGVIQPGSD LVEIVPLDDK LLVEAKIRPQ DIAFLHPGQG
AIIKLTAYDY TIYGGLTGQL EQISPDTVTD KEGNSFYIIR LRTDKNYLGS ADKPLLIIPG
MVASVDIITG KKTILSYLLK PIIRAKAEAL RER
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