Gene Pecwa_1199 details

Gene Information

• Locus tag: Pecwa_1199
• ID: 8529588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1297947
• End bp: 1298594
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 52%
• Product: anti-RNA polymerase sigma factor SigE
• Protein accession: YP_003258620
• Protein GI: 261820514

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000199919
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAAAG AGAAACTTTC CGCTTTAATG GATGGCGAAG CAGTAGATTC CGAACTGTTA 
GGTGCATTGT CACGGGATGA CGCGTTGCAG CAAAGTTGGC AAAGTTATCA TCTAATTCGT 
GATGCGTTAC GTGGTGATGT GAGTGAAAAC GTGATTCACA TAGACATCGC ATCTCGTGTT 
GCCGCTGCAA TCGAAAAAGA ACCTGTTCGC CTGGTTCCAC AAGCGCAGCC TGAATCTCAG 
CCACAACCTG TCGAGTGGGT GAAGATGCCG TTCTGGCATA AAATCCGCCC GTGGGGCAGC 
CAACTGACGC AAGTCGGTGT TGCTGCCTGC GTATCTTTAG CCGTGATTGT TGGTGTACAA 
AATTATCAGC AGGGCAATGC GCCCGAACAT GTTGTGGAAT CCGGCGTGTT CAGCACCTTA 
CCTGCTATGG GCACGGCTTC CCCTGTGAGC TTGGGCGTGC CGTCAGAAAA TATTGCCCCT 
CACAGTGGCC AACAAAAATC TGATATGCAG CGTAATCGCC TTAACGCCAT TTTGCAGGAC 
TACGAATTAC AGCGCCGGTT GCATGCCGAG CATGCTTTGC CGCAGGACGA TCAGCAAGCG 
GCTATTCAGG TTCCCGGCAC TCAATCATTA GGAACACAGC CCCGGTAA 

 

Protein sequence

MQKEKLSALM DGEAVDSELL GALSRDDALQ QSWQSYHLIR DALRGDVSEN VIHIDIASRV 
AAAIEKEPVR LVPQAQPESQ PQPVEWVKMP FWHKIRPWGS QLTQVGVAAC VSLAVIVGVQ 
NYQQGNAPEH VVESGVFSTL PAMGTASPVS LGVPSENIAP HSGQQKSDMQ RNRLNAILQD 
YELQRRLHAE HALPQDDQQA AIQVPGTQSL GTQPR