| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1184 |
|---|
| Symbol | |
|---|
| ID | 8529567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1280607 |
|---|
| End bp | 1281419 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | sulfate ABC transporter, inner membrane subunit CysT |
|---|
| Protein accession | YP_003258605 |
|---|
| Protein GI | 261820499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGC GTTCTTCCTC AGTGATCCCC GGTTTCGGGC TAACGTTAGG GTTTAGCCTG
AGCTATTTAG GATTAGTTGT CCTCATCCCA TTGGCAGGAA TGTTTTTGTA TGCAAGCCAA
TTAACGTTTG GCCAGTTTTG GGAGCTGATC ACCAGCCGTC AGGTGCTTTT TTCTCTACGG
CTTTCGTTTG GTACTGCATT GGCTGCCGCT TTTATTAACG GTATCCTCGG GACGTTGCTG
GCGTGGGTGC TGGTACGTTA TACCTTCCCC GGCCGTAAAG TGATCGATGC CATGATCGAC
ATGCCCTTTG CCCTGCCAAC CGCAGTGGCG GGGATCGCTC TGACGGCGCT TTATGCACCA
AATGGCCTGA TTGGTTCGTT ATTTCCATTC AAAATTGCCT ACACCGGCAT TGGCATCACG
CTGGCGCTCA TTTTTGTCAC GCTGCCTTTC GTGGTCAGAA CGCTACAGCC GGTTCTGGCC
GATATTCCCA AAGAAGTGGA AGAAGCCGCC GCCTGCCTTG GTGCGCGTCC GCTTCAGGTT
TTCCGCCATG TATTACTTCC CGCACTGTTA CCCGCGTGGC TGACGGGCTT TGCTCTGGCC
TTTGCCCGCG GCGTGGGGGA ATACGGTTCG GTGGTGTTTA TTGCGGGAAA TATTCCGTTT
AAAACCGAAA TCCTGCCGCT GCTGATTGTC TCCAAACTCG ATCAGTATGA TTACAAGGGA
GCAACCGGGA TCGGCGTATT CATGCTGCTG GTTTCTTTCA TTATGCTGCT GCTGATTAAC
GTGTTGCAGC GCCGCATTCA ACCGAAACTG TAA
|
|---|
| Protein sequence | MSQRSSSVIP GFGLTLGFSL SYLGLVVLIP LAGMFLYASQ LTFGQFWELI TSRQVLFSLR
LSFGTALAAA FINGILGTLL AWVLVRYTFP GRKVIDAMID MPFALPTAVA GIALTALYAP
NGLIGSLFPF KIAYTGIGIT LALIFVTLPF VVRTLQPVLA DIPKEVEEAA ACLGARPLQV
FRHVLLPALL PAWLTGFALA FARGVGEYGS VVFIAGNIPF KTEILPLLIV SKLDQYDYKG
ATGIGVFMLL VSFIMLLLIN VLQRRIQPKL
|
|---|
| |