Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1167 |
Symbol | |
ID | 8529550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1257811 |
End bp | 1260255 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | ATP-dependent RNA helicase HrpB |
Protein accession | YP_003258588 |
Protein GI | 261820482 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTTTAC CGCCCGTCAG CGCCGTGCTG GATGATGTGA TAACGGCGCT ACATACTGCG CCTCAGGTGC TGCTCAATGC CCCAACGGGG GCGGGGAAAT CAACTTGGCT GCCGTTGCAA TTACTGCAAC AGGGCAATTT GAATGGGCGC ATCATCATGC TGGAGCCGCG CCGACTGGCG GCGAAGAGTG TTGCCTGGCG GTTGGCACAG CAGCTAGGTG AAGAACCGGG GCAAACGATA GGCTATCGGA TGCGCTCGGA ATCCTGCGTG AGCAATGCAA CGACGCTGGA AGTTGTCACT GAAGGTATGC TAACCCGCTT GCTGCAACAG GATGCGGAAT TGCAAGGCGT AGCGCTGATT ATCCTTGACG AATTCCATGA GCGTAGCGTG CAGGCCGATT TGGCATTGGC GTTGCTGCTT GATGTGCAAC AAGGGCTGCG TGACGATTTA AAACTGCTGA TTATGTCGGC CACACTCGAC AATGCACGGC TGGCGATGCT GCTGCCGGAG GCTGTCTGCG TGGTCTCCGA AGGTCGCAGC TATCCGGTAG AACGGTGTTA TGCACCGCTA AATAGTCAGG AACGTTTAGA AGAGGGCGTT GCACGACAGG TCCGGCGTTT GCTCAGTGAG GAAGACGGCT CTCTGTTGCT GTTTCTGCCC GGCGTCGCAG AAATTCGCCG CGTGCAGGCG CTGCTGGAGA ATAGCGTGTC GAGTGAGACG GATCTCTGTC CTTTATATGG CGCATTGACG CTGGCGGAAC AGCAAAAGGC CATTCTTCCA GCGGAGCCGG GTCGTCGTAA GGTGGTGTTA GCCACTAATA TTGCGGAAAC CAGTTTGACA ATTGAAGGTA TCCGGCTGGT GGTGGACAGC GGCCTTGAAC GCGTAGCCAG CTTTGATGTG AAAAGCGGCG TCACCCGGCT GGTGACACAG CGCATCAGTC AGGCATCTAT GGTCCAGCGC GCGGGGCGTG CGGGACGTTT AAGCCCCGGT ATTTGCTGGC ATCTGTGCTC TCGTGAACAG GCAGAACGTG CGGCAGTACA AAGCGAAGCC GAGATCCTGA GTAGTGATTT AAGCAGCGTC TGGCTGGATT TACTACAGTG GGGCTGTACC GATGTGGCGC AGTTAACCTG GCTGGATACG CCGCCAGCAC CTGCGCTTTA TGCCGCTCGT CAACTGCTGT GCCAGCTTGG CATCACTGAT GAACATGAGC GGTTGACCGC CGAGGGGCGC AAGATTGCGA CACTCGGCAG CGATGCTCGA TTGGCAACGA TGCTGTATGC CGCGTCACAG CAAAGTTCGG GTGCGTTGGC GACCGCAGGG TGTCTGGCGG CGATACTTGA AGAGCCGCCG CGTAGCGGAT CGATCAATCT GGCTGACTGG CTGCATCGTC CATTACCGCA CTGGCTGCGG CGAGCAAAAC AGTTGACGCG CCGTTTATCG ATGACCTCGG GGAATATTGA CGACGGCGAA GCTGACTGGC TGCTGGCTCA GGCTTTCCCT GACCGTATCG CCCGGCGGCG CAGTCAGGAT GGGCGTTACC AACTCGCTAA CGGTAGCGGC GCGATGATGT CGGCGGATGA CGCGTTGTCA GGTAACGAAT GGCTGCTGGC ACCGGCGCTA TTGCAGAATA GTCAGAGTGC AGACGCGCGG ATCCTACTGG CGTTGCCGTT GGATATTGAA CGGCTGGAAC GGCGGTTACC TGGATTAATA AATGAACGTA ACGTGGTGCA CTGGGATGAA GAAAAGGGTA CTCTGCGCGC CAGCCAGCGC GACCAGATAG GCTGCCTGAT TCTGCGAACG CGCCCGTTGA ATAAGCCTTC CGATGAGGCA TTACAGCAGG CGATGCTATT CTGGATTCGG GAGCAGGGGC TTAAAGCATT AAATTGGGAT GCAGCAGCGT TGCAGCTACG CGCGCGCCTA CAGTGCGCTT GTCAGTGGTT ACCTGAGGTT GACTGGCCGC AAGTGGATGA CGACACGCTA CTGGCAACGC TGGAGATCTG GTTGCAGCCG TCACTGTCTG GCGTGCGCGA TTTACGTGCG CTGCACCAGA TTAATTTGAG CGATGCCCTG TTGCGGCTGT TGGACTGGTC GCTGCGCCAG CGGTTGGATA GCGCGCTACC CACGCACTAC ACCGCGCCCG GCGGGAGTCG TTTGCCCATT GCCTATTATG ACGATAAGCC ACCAGTGCTG TCGGTACGGA TGCAGGAAAT GTTCGGCGAG CAGCAGAGTC CGCTGCTGGC GGAAGGTCGT GTGGCGCTGG TGCTGGAACT TTTATCACCA GCACAACGTC CATTACAGAT TACGCGGGAT TTAGCCGCAT TTTGGCAAGG CACTTACCGC GAGGTGCAAA AAGAGATGAA GGGGCGTTAC CCCAAACATA TCTGGCCGGA CGATCCGGCG AATACGGCGC CGACGAGGCG TACCAAGAAA TATCAGAATC ACTAA
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Protein sequence | MILPPVSAVL DDVITALHTA PQVLLNAPTG AGKSTWLPLQ LLQQGNLNGR IIMLEPRRLA AKSVAWRLAQ QLGEEPGQTI GYRMRSESCV SNATTLEVVT EGMLTRLLQQ DAELQGVALI ILDEFHERSV QADLALALLL DVQQGLRDDL KLLIMSATLD NARLAMLLPE AVCVVSEGRS YPVERCYAPL NSQERLEEGV ARQVRRLLSE EDGSLLLFLP GVAEIRRVQA LLENSVSSET DLCPLYGALT LAEQQKAILP AEPGRRKVVL ATNIAETSLT IEGIRLVVDS GLERVASFDV KSGVTRLVTQ RISQASMVQR AGRAGRLSPG ICWHLCSREQ AERAAVQSEA EILSSDLSSV WLDLLQWGCT DVAQLTWLDT PPAPALYAAR QLLCQLGITD EHERLTAEGR KIATLGSDAR LATMLYAASQ QSSGALATAG CLAAILEEPP RSGSINLADW LHRPLPHWLR RAKQLTRRLS MTSGNIDDGE ADWLLAQAFP DRIARRRSQD GRYQLANGSG AMMSADDALS GNEWLLAPAL LQNSQSADAR ILLALPLDIE RLERRLPGLI NERNVVHWDE EKGTLRASQR DQIGCLILRT RPLNKPSDEA LQQAMLFWIR EQGLKALNWD AAALQLRARL QCACQWLPEV DWPQVDDDTL LATLEIWLQP SLSGVRDLRA LHQINLSDAL LRLLDWSLRQ RLDSALPTHY TAPGGSRLPI AYYDDKPPVL SVRMQEMFGE QQSPLLAEGR VALVLELLSP AQRPLQITRD LAAFWQGTYR EVQKEMKGRY PKHIWPDDPA NTAPTRRTKK YQNH
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