Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1154 |
Symbol | |
ID | 8529537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1246863 |
End bp | 1247399 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_003258575 |
Protein GI | 261820469 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.200609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAC ATACCGTGGA AGTCATGATT TCTGAGCAGG AAGTGATGGC GCGGGTTACC GAACTGGGGC AACAGATCAG CGAACACTAC CGTGATAGCG GCAGCGATAT GGTGCTGGTG GGGTTATTGC GCGGCTCGTT TATCTTTATG GCCGATTTAT GCCGGACGAT CGATGTTCCT CACGAAGTGG ATTTCATGAC GGCATCCAGC TATGGCAGCG GTATGAACAG TACGCGCGAT GTTAAAATTC TGAAAGATCT GGATGAAGAT ATTCGCGGCA AAGATGTATT GATCGTTGAA GATATCATCG ACTCAGGCAA TACCCTGAGC AAAGTGCGGG AAATTCTACA ACTGCGTGAG CCGAAATCGT TGGCTATCTG TACGCTGCTG GACAAACCAG AGCGCCGTGA AGTGGCAGTA AAAGTAGAGT GGGTTGGGTT CTCGATCCCT GATGAGTTCG TCGTGGGTTA CGGCATCGAC TATGCTCAGC ACTATCGCCA TTTACCTTAC GTTGGTAAGG TTGTTCCGCA AGAATAG
|
Protein sequence | MMKHTVEVMI SEQEVMARVT ELGQQISEHY RDSGSDMVLV GLLRGSFIFM ADLCRTIDVP HEVDFMTASS YGSGMNSTRD VKILKDLDED IRGKDVLIVE DIIDSGNTLS KVREILQLRE PKSLAICTLL DKPERREVAV KVEWVGFSIP DEFVVGYGID YAQHYRHLPY VGKVVPQE
|
| |