Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1141 |
Symbol | |
ID | 8529523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1235406 |
End bp | 1236161 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_003258562 |
Protein GI | 261820456 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTTA TCAGTATCCC CGCACTTAAG GACAACTACA TTTGGTTATT GAGTAATAAA GAAAACCGCT GTGTGATCGT CGATCCAGGT GAAGCGACCC CAGTACTTAA TACTCTCGAT CAACACTCAC TTTTTCCCGA AGCAATCTTG CTCACTCACC ACCATAACGA CCATGTTGGG GGCGTTAGCG AACTCCTCAA ACATTACCCT AATCTGCCCG TTTTTGGGCC AAAAGAAACC GCTAAATGTG GCGCAACCTA CCTCGTCGAG GAGGGAAATA CCGTCTCATT GTTAAATTCG GAATTTTCTG TAATTGAAGT TCCAGGACAT ACATTAGGTC ATATTGCCTA CTACAATGCG CCATTTTTGT TCTGCGGCGA TACCCTATTT TCAGCAGGAT GCGGCCGGAT CCTTGAAGGA AACCCCATGC AAATGTATGA ATCAATTAAA AAAATATCGA ACTTCCCTGA TGATACCGTG GTGTGCTGTG CTCATGAATA TACGTTATCA AACTTAACGT TTTCTAATGC TATGTGGCCT GAAGATCCAA ACATTGAAGC TTATCTCCAT AAAATCAGCC AGATACGTGA AAAATCGCAG TCTAGCTTGC CAACAACATT AGGGCTGGAG AGAAGAATTA ATCTTTTTCT ACGTTGTCAT GAAATTGATT TAAAAAGAAA ATTATCAATA GAACCTGAAA ATATAGAGAA TTGGCAAGTT TTTAAACTGC TACGCAGCAA GAAAGACAGC TTCTGA
|
Protein sequence | MNLISIPALK DNYIWLLSNK ENRCVIVDPG EATPVLNTLD QHSLFPEAIL LTHHHNDHVG GVSELLKHYP NLPVFGPKET AKCGATYLVE EGNTVSLLNS EFSVIEVPGH TLGHIAYYNA PFLFCGDTLF SAGCGRILEG NPMQMYESIK KISNFPDDTV VCCAHEYTLS NLTFSNAMWP EDPNIEAYLH KISQIREKSQ SSLPTTLGLE RRINLFLRCH EIDLKRKLSI EPENIENWQV FKLLRSKKDS F
|
| |