| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1074 |
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| Symbol | |
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| ID | 8529448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1162001 |
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| End bp | 1162999 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | type VI secretion protein, VC_A0111 family |
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| Protein accession | YP_003258495 |
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| Protein GI | 261820389 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGTA CAGATAGGTC AACACTCAAT GATGTAACGT TCCGTCAGGA TGTCTCACGC
TTCAATTTTT TCCAACTGGT GGAATTACTC AACCAGTTGG AAGGCGTGGA TCTGGAACAA
GAGCTGGATT TTCGCCCTGA ACAGGAACGT CTGCGTTTTC GCTCCACGGC CTCCATCGGT
TTTCACCCCA GCGATATCTT GCGGGTGGGG TGTGATGAAG AGGGCCGTCA GGAATTGGAA
GTCGCGTTCC TGGGCCTGCA CGGTAGTCAG TCGCCGATGC CCGGCTATTA CCTCGAAGAA
CTGGCTTGGG AATACGCGCA GGGCGAACAG AAGCTGGGCG TGTTTCTCGA TTTCTTTCAT
CACCGCTTAC TCACGCTGTT GCACCGCGCA TGGCGGAAAT ATCGCTATCA CGTCCGCTTT
CAGAATGAGG GGGAGGATGG ATTCTCCCGT CTGATGTTTG CGCTCGTGGG CTTGGGCAAT
GATGCCGTGC GCGACAGTCT GCCGGTTAAC CGCGCCAAGA TGCTTTCCTA CGCTGGGGTG
TTGGCAAGCC CCAGCCGTTC CCCTGAAGTG GTCGCCGGGT TAGTTATTCA CTGTTTTGAC
CTGGATGATG TTGCCGTCTT GGCCTGGCAG CACCGGCGCG TTCCCATTCA TGAAGGGCAG
CAGAACCGGC TGGGAAAAGG AAACATGATG CTGGGCGGTG ATTTTGTCAT CGGTGACAAA
GTGAATGATT GTGCCGGCAA GTTTTTGCTC AAGATCGGCA ATCTCAGTTT TAGCCGCTTT
CTCAGCTTTC TGCCCAACGG TGAACATTTT CAGCCGCTGG TGCGTTTTGT CTCTTTCATT
CTTCGCGATC AGTTGGCTTG GGATCTCCGT CTTGGTTTCG CAGAAGATGA AGCTAAGGGC
TTAAGTCTGG GCAGCGAGCA AAGCAGCCGT TTGGGGTGGA GCAGCTTTCT CGGGCAGCCG
CCAGCGGATC CCTATGTGAC GATTTGTGTG CAGGAGTAA
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| Protein sequence | MAGTDRSTLN DVTFRQDVSR FNFFQLVELL NQLEGVDLEQ ELDFRPEQER LRFRSTASIG
FHPSDILRVG CDEEGRQELE VAFLGLHGSQ SPMPGYYLEE LAWEYAQGEQ KLGVFLDFFH
HRLLTLLHRA WRKYRYHVRF QNEGEDGFSR LMFALVGLGN DAVRDSLPVN RAKMLSYAGV
LASPSRSPEV VAGLVIHCFD LDDVAVLAWQ HRRVPIHEGQ QNRLGKGNMM LGGDFVIGDK
VNDCAGKFLL KIGNLSFSRF LSFLPNGEHF QPLVRFVSFI LRDQLAWDLR LGFAEDEAKG
LSLGSEQSSR LGWSSFLGQP PADPYVTICV QE
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