Gene Pecwa_1060 details

Gene Information

• Locus tag: Pecwa_1060
• ID: 8529434
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1149619
• End bp: 1150392
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 39%
• Product: putative transcriptional regulator, CadC
• Protein accession: YP_003258484
• Protein GI: 261820378

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTTATT TGATTAATGA TCTAATCATT TTCAACGAGG GTGAGGGAAC GCTGGCATGG 
GTAGGGCGTG AAAGTGAAGC AATCTCTGTG AATTTTCCTA TTTCACGATT GCTCTGCTTA 
TTAATAGAGA ATCAAGGGAT AACGCTAAGC CGTGATTTTT TGCTAGAGGA AGCACTGGAA 
AAGCATGCGC TTTGCCCTTC TATTAATAAT CTCAACAATT ATCTCTCTCT GCTAAGGAAG 
GTATTACGCG AGTTTGATAT TGCCGATTCG ATAGTAACTA TTCCTAAAAT AGGCATTGTT 
TTTAATGTTG AAAGCCGTGT TTTTCCTTCG AAGGAAAATA GAGAGGTGGA GGGAGAAAAT 
AATTTAAATC AATGTGTTGA AAGGGGCGTT GAACCAAAGG ACTATGAGGG AGAAAATTCG 
TTTTCTATAG AACATCACGC GATGCCTGAG CCGGTAAAAA AACAGCAATA CATCAAGTAT 
CTTATCCTCT GGACTGTGGT TGTTGGTGCA ATCCTGCTAA CGCTAGCGAA CGTAAATCGT 
TTTCCGTATC GACAGGTTGT CAACGTGAGT ATGAATGGGA AATGCGATCT TTTCTATTTG 
TATGACAGTG TGAGTCATTC TCTCCCGACC GGTTATGAAC ATCTTTGTTC AGGTAACACA 
TTGTTCTTTA ATTCGAAAAA AACGGTTATG TCTGGAACGT TGGATAAGAA GAGTGAAATT 
GCTATTTCCT GCAAGAAAGA TGGGGGGAAT TGTGTAACTT ATGTTAATAA TTAA 

 

Protein sequence

MVYLINDLII FNEGEGTLAW VGRESEAISV NFPISRLLCL LIENQGITLS RDFLLEEALE 
KHALCPSINN LNNYLSLLRK VLREFDIADS IVTIPKIGIV FNVESRVFPS KENREVEGEN 
NLNQCVERGV EPKDYEGENS FSIEHHAMPE PVKKQQYIKY LILWTVVVGA ILLTLANVNR 
FPYRQVVNVS MNGKCDLFYL YDSVSHSLPT GYEHLCSGNT LFFNSKKTVM SGTLDKKSEI 
AISCKKDGGN CVTYVNN