Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1001 |
Symbol | |
ID | 8529375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1080852 |
End bp | 1081751 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Dyp-type peroxidase family |
Protein accession | YP_003258425 |
Protein GI | 261820319 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.153616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCAA TTCAAAGCGG TATTTTATTG GAACACCGCC GTTTTGCCAT TTTTATGGAA GCGATGATTC AGGGAGAGTT TGATGCTATC CGGCAGGGAT GCAAAAAATT CTGTCAGACA TTACAAGATT TACAGCAGCA GTACCCCGAT GCTGGGTTAG GTGCGGTGCT GGCGTTTGGT AACGATGTTT GGCGCGATCT GGACTGCAAC CACAGCGCGA CGGAACTGAA ATCGTTTACG CCGTTGGGTA AAGGGCTCGC CCCAGCAACG CAGCGCGATC TGTTGATCCA CATCCAATCG CTCCGCCATG ATGTTAACTT CACGCTGGCA CAGGCGGCGC TGGCCGCGTT TGGTAGCGCG ATTCGTATCG AAGAAGAAAC ACACAGTTTC CGCTGGGTAG AAGATCGCGA TTTAAGCGGC TTTATCGACG GTACGGAAAA CCCACAGGGT GAGGCACGCC ACGCCGTGGC AATTATCCCT GAAGACCAGC CGGATGCCGG TGGCAGCTAC GTGTTTACCC AGCGCTGGGA ACACAATCTG AAGCAGTTGC AGCGTTTTAG CGTGGAACAG CAAGAACAGA TGATCGGGCG CACGAAGCAG GATAACGAAG AGCTGTCTTC CGATGAACGC CCTGTAACGT CGCACCTCAG CCGCGTGGAT TTAAAGGAAG ACGGCAAAGG GCTGAAAATC CTACGTCAGA GCCTGCCTTA TGGCACCGCA AGCGGGAAGA ATGGGCTTTA TTTCGTCGCC TATTGTGCGC GTCTGCATAA CATTGAACAG CAGTTGCTGA GTATGTTCGG CGATCGTGAC GGCAAACGTG ACGATATGTT GCGCTTTACG CGCGCGGTCA GCGGCAGCTA TTTCTTTGCG CCGTCTTTGG CGAAGCTTTT GTCACTGTAA
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Protein sequence | MTPIQSGILL EHRRFAIFME AMIQGEFDAI RQGCKKFCQT LQDLQQQYPD AGLGAVLAFG NDVWRDLDCN HSATELKSFT PLGKGLAPAT QRDLLIHIQS LRHDVNFTLA QAALAAFGSA IRIEEETHSF RWVEDRDLSG FIDGTENPQG EARHAVAIIP EDQPDAGGSY VFTQRWEHNL KQLQRFSVEQ QEQMIGRTKQ DNEELSSDER PVTSHLSRVD LKEDGKGLKI LRQSLPYGTA SGKNGLYFVA YCARLHNIEQ QLLSMFGDRD GKRDDMLRFT RAVSGSYFFA PSLAKLLSL
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