| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0996 |
|---|
| Symbol | |
|---|
| ID | 8529370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1071529 |
|---|
| End bp | 1072476 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_003258420 |
|---|
| Protein GI | 261820314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTA ACGCTGATTT TGAGCAGATC CAGCAGCAAG CCGCTGAATG GATATTACGC
TTCTCGGAAG TCGAGCAGGA TAGTGACGAC GCGATATTAC TGTATAAAGA GTGGCAGCAG
TGGTGCCTGA TCGATGCTCG TCATCCTGTG GTTTATCATC AAATGCAGCA ATTATGGGCA
AGTGCGACAA TTACACCTGC TTCGACATCA CCTAAACCAC GTTCATCCCG TTATGTTGCT
CTGGCGATTT TCATCGCAGG GGGCTGGCTG CTAAGCCAGT TACCTTATGC TTATTGGTTG
GCCGACCAAC GAACGGTAGC GGGTGAAGTG CGACGTATTG TGCTGGATGA CGGCAGTGAA
CTGGTGCTCA ACAGCAATTC GGCTGTGAAT ATCGCCTTTA CATCACAGAA ACGAACGGTC
ACGTTGCTAC GTGGCGAAGT CTACGCGCAT GTTGCCAAAG ATCCGCGTAG CAGGCCGTTT
GTGATTGACA GCGCACAGGC AACGGCCCAA GCCTTAGGCA CTCGCTATAG CGTGCGTGAT
GCAGGGGAAG ATACGCTGGT AAGCGTTGAC GAGTCTCGCG TTCGCATTAC TGCAAATAAG
AACCCGGATA TCCGTCTTGA CCTTGGTGCA GGCCAACAAA TTGGACTCGA TCAGCACCAT
ATTACTCGAC CGGTGAGTGC ATCAACGGAA ACGGGTTGGA TTCACAATCA ATTGATTTTT
GAAAATGCAC CGTTCATTCA GGTTATTGAT GAACTTTCCC GCCACTATCC AGGGCTGATT
TATCTGGATC CACGCCAGCG TCAGGAACTC GAGCGTTTGC GCTTTACTGG CGTTCTACCA
TTGAATAACA GCCAACAGGC ACTCGAGTTA CTGCAACACT CCCTTCCTAT CTCCGTCCGA
CAGTCCTTCG GTTATATTTC CTGGATTAGC GAAAATAAAA AGCGTTAA
|
|---|
| Protein sequence | MKRNADFEQI QQQAAEWILR FSEVEQDSDD AILLYKEWQQ WCLIDARHPV VYHQMQQLWA
SATITPASTS PKPRSSRYVA LAIFIAGGWL LSQLPYAYWL ADQRTVAGEV RRIVLDDGSE
LVLNSNSAVN IAFTSQKRTV TLLRGEVYAH VAKDPRSRPF VIDSAQATAQ ALGTRYSVRD
AGEDTLVSVD ESRVRITANK NPDIRLDLGA GQQIGLDQHH ITRPVSASTE TGWIHNQLIF
ENAPFIQVID ELSRHYPGLI YLDPRQRQEL ERLRFTGVLP LNNSQQALEL LQHSLPISVR
QSFGYISWIS ENKKR
|
|---|
| |