| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0910 |
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| Symbol | |
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| ID | 8529283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 976965 |
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| End bp | 978680 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Rhamnogalacturonate lyase |
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| Protein accession | YP_003258335 |
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| Protein GI | 261820229 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCGAT CTGTCTTGTT GTTGGTGGGA GCCATGCTGG CACCCTATGG CTATAGTGCG
CAGGATAATG CCGTGTCGTT ATCCGTTTCG GGCTTGAATA CCGTGCTGGA TAATGGCTTG
CTGAAAGTCA CATTCGGTGA GGATGGCAGC GCAGTCAGCA TGGTGACGGG GGGTAAAAAT
ATCGTCACCA ACCTGTCCGG TGCGGCACGT GACCCGAGCA AAACCCGTAG TGCTTACCTC
GACTATTACG TTAAAGGCGT AAAAGATTTC GTCCCCGAGC GAGTGGAGGT GTTGCGTAAC
GATCGTGACA TGGCGCATGT GGCCTATATT GACGATCGCG GTGGGCTGCT AAAGCTCGAA
TATCACCTGA TTATGCGGCG TGGCGTTAGC GGGCTTTATA GCTATGTGGT GGCGGAAAAT
AGCGGAAGTC AGGATGTTAA CATCAGTGAA CTGCGTAACG TTTATCGCTT CGATCCTGCG
CGGTTAGACC ACCTCTACAG CGGCGTTCGT CAGGGCAAAC CGCTGCTTTA TCGCCAGCTT
GAGGCCTCAC CAAAGGTGCA GGATGAAACC TGGCGGTTGC CTGATGGCAG CATTTATTCC
AAATATGATT TCGCTGGCTA CATGCGTGCC GTGCCTTTCT GGGGCGTTTT CGGTAACGGC
GTAGGGGCAT GGCTGATTCA CGGCAATCGG GAGTATTTCT CCGGCGATGC GCTCAAGCAG
GATTTGCTGG TGCATCAGGA TGCGATCATT CTGAACTATA TGACGGGTTC GCACTTTGGT
ACGCCGGATA TGAAAGCCCC GCCGGGCTGG AAAAAATTCT ACGGACCGTG GCTGCTCTAC
ATTAACCAGG GCGATACCAA GCAGATGCTA GCGGATGCAC AGCGTCAGGC GCTGACGGAA
ACGGTGAGTT GGCCGTACCA ATGGGTGAAC GACTCCCGCT ATGCGTTTGA ACGCACGCAG
GTTAGCGGAC GCGTTGCTAG CCAGCAGCCA GTCACAGTCG TGCTTTCATC ATCATTGGAT
GAGCCGTTTG ATATGCAGAC CCGCGGTTAT TCGTATCAGG CAACGACAGA CTCACAGGGA
AATTTTGCTA TTCCTCATGT CCGTCCGGGC AATTACCATC TAACCGTGTA CGCCAACAGC
GGTACGCAGC CAGGAGTATT GGCAGAGCAA ACGCTGTCCG TTTCCGGTGA TAAGAAAGTG
CTACCAGTGA TAACACTGCC AAAAGCTGAA CCGATTGTCT GGGCGATTGG ACAGGCAAAC
CGGCAGGCGA GCGAATTTCG CTTTGGTAAC GAGGCGCGCA ATACCCGCTG GCAGCATGAG
GTTCCGGCAA ATCTGACGTT CGATATTGGC CGTAGCGACT ATCAGCACGA CTGGTACTAC
GCACAGACCA AGCCGGGAAA ATGGGATATC CGTTTTGCTC TAAAACCTGA AAAGAAAACC
TATTTCCTGA ATGTCGCTCT GGCGGCGGCG AGCAATAGCG GCATGAGTGA ACCGTCCACG
CCACAGTTGG CGGTCATGGT CAACGGCACT ACGCTGGAGA CGTTGACTTA CGAGAACGAC
AAAACTATCT ATCGTGGTGC GCTACAGAGC GGTCGTTATC ACGTTGCGCG TATCCCCGTG
TCATCCCGTC TCCTGAAAAA CGGCAACAAC ACCATCACAC TGCAATTAAA AGGCGGTAGC
GTGATGTATG ACGTGGTGAC GTTAAGCGAG GAATAA
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| Protein sequence | MKRSVLLLVG AMLAPYGYSA QDNAVSLSVS GLNTVLDNGL LKVTFGEDGS AVSMVTGGKN
IVTNLSGAAR DPSKTRSAYL DYYVKGVKDF VPERVEVLRN DRDMAHVAYI DDRGGLLKLE
YHLIMRRGVS GLYSYVVAEN SGSQDVNISE LRNVYRFDPA RLDHLYSGVR QGKPLLYRQL
EASPKVQDET WRLPDGSIYS KYDFAGYMRA VPFWGVFGNG VGAWLIHGNR EYFSGDALKQ
DLLVHQDAII LNYMTGSHFG TPDMKAPPGW KKFYGPWLLY INQGDTKQML ADAQRQALTE
TVSWPYQWVN DSRYAFERTQ VSGRVASQQP VTVVLSSSLD EPFDMQTRGY SYQATTDSQG
NFAIPHVRPG NYHLTVYANS GTQPGVLAEQ TLSVSGDKKV LPVITLPKAE PIVWAIGQAN
RQASEFRFGN EARNTRWQHE VPANLTFDIG RSDYQHDWYY AQTKPGKWDI RFALKPEKKT
YFLNVALAAA SNSGMSEPST PQLAVMVNGT TLETLTYEND KTIYRGALQS GRYHVARIPV
SSRLLKNGNN TITLQLKGGS VMYDVVTLSE E
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