| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0861 |
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| Symbol | xerD |
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| ID | 8529233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 914276 |
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| End bp | 915175 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_003258287 |
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| Protein GI | 261820181 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAC ACGATCAGGC ACTTATCGAA CAGTTTCTCG ACGCGCTGTG GCTGGAACGA
AATCTGGCTG AGAATACATT GGCGTCTTAT CGCTTGGATC TGCGAACGCT CGCGGAGTGG
CTTGCACATC GTGACAATGA TTTTCTACAG GTGCAGGCGC TCGATCTCCA GGCATTTCTC
GCCGACAGAG TTGATGGGGG TTACAAGGCG ACCAGTTCTG CGCGTTTGCT GAGTGCGATG
CGTCGCTTCT TTCAGTACCT TTATCGGGAA AAGCTACGTA GCGACGATCC GAGTGCGGTG
CTGTCGTCTC CGAAACTGCC GCTGCGTCTA CCTAAAGATT TGAGCGAAGC GCAGGTTGGG
GCGTTACTCG ATGCCCCGAG CATTGAACAA CCGCTGGAAT TACGCGATAA AGCCATGCTT
GAGGTATTGT ATGCGACGGG GCTACGTGTT TCCGAACTGG TTGGCTTGAC GATGAGCGAT
GTCAGTCTGC GGCAAGGTGT GGTGCGCGTG CTGGGTAAAG GCAATAAAGA ACGGCTGGTG
CCGCTGGGTG AAGAAGCGGT GTATTGGATC GAGTATTATC TGGAACATGG TCGTCCGTGG
TTGCTGAATG GGCAGACGCT GGATGTGCTA TTTCCCAGCA ATCGCGCTCG GCAAATGACG
CGCCAGACGT TCTGGCATCG CATCAAACAT TATGCGGTGC AGGCGTCGAT CGACAGCGAA
AAGCTCTCGC CGCACGTTTT ACGCCATGCG TTTGCGACCC ATTTATTGAA CCACGGCGCG
GATTTACGGG TCGTACAGAT GCTCTTGGGG CACAGCGATC TTTCCACGAC GCAGATTTAC
ACGCATGTGG CGACGGAGCG GCTGAAGCAG CTTCACCAGC AGCACCATCC GCGCGCCTAG
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| Protein sequence | MQEHDQALIE QFLDALWLER NLAENTLASY RLDLRTLAEW LAHRDNDFLQ VQALDLQAFL
ADRVDGGYKA TSSARLLSAM RRFFQYLYRE KLRSDDPSAV LSSPKLPLRL PKDLSEAQVG
ALLDAPSIEQ PLELRDKAML EVLYATGLRV SELVGLTMSD VSLRQGVVRV LGKGNKERLV
PLGEEAVYWI EYYLEHGRPW LLNGQTLDVL FPSNRARQMT RQTFWHRIKH YAVQASIDSE
KLSPHVLRHA FATHLLNHGA DLRVVQMLLG HSDLSTTQIY THVATERLKQ LHQQHHPRA
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