Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0810 |
Symbol | truB |
ID | 8529179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 859301 |
End bp | 860245 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_003258236 |
Protein GI | 261820130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.384443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTC CTCGTCGCCG TGGCCGTGAT GTACACGGCG TATTGTTATT AGATAAGCCG CAAGGCGTGT CGTCTAATGA TGTTTTGCAG AAAGTAAAAC GGATTTTTAA CGCTAACAGA GCGGGTCATA CAGGGGCGTT GGATCCATTA GCCACCGGTA TGCTGCCGAT TTGTCTTGGG GAAGCGACAA AGTTTTCCCA ATATTTGCTG GATTCTGATA AACGCTACCG TGTCATTGCT CGCCTTGGGC AACGCACTGA TACCTCTGAT GCCGATGGCA ACGTGATTGA AGAACGTGCT ATTGGTTTTT CTGCTACGGA TCTGGAGCAG GCGCTGGAGA GTTTTCGCGG TACTACGCAG CAAGTACCAT CCATGTACTC AGCGCTGAAA TACCAGGGGC GTAAGTTGTA TGAGTACGCA CGTCAGGGGC TGACGGTTCC GCGTGAAGCA CGTGAAATTA CCGTTTACGA ACTTCAGTTT ATTCGCTGGG AAGGCGATGA GTTGGAGCTA GAGATCCACT GCTCGAAAGG GACGTATATC CGTACCATCA TTGACGATCT GGGTGAAAAG CTGGGATGTG GTGCGCATGT GATTTACCTG CGTCGCTTGC AGGTTGCTGC GTATCCGACT GAAAGAATGG TGACGCTGGA ACAACTGGCT ACCTTGGCCG AGCAGGCTCA GACTGAAGAG CTCGCACTTT CTCTGACCCT TGACCCTCTA TTGATGCCGA TGGAAAGCCC GGTTATTGAT TTCCCTGAAG TGAATTTGCC ACCCGTTGTC GCAGGCTATT TGAAGCTTGG ACAGGCTGTT CAGGCAGCGC ATGCGCCGTT GAACGGCATG GTGAGAATCA CCGAGGGAGA CGCGCACAAA TTTATCGGAA TGGGTGAAAT TGACGACGAT GGTCGCGTTG CGCCGCGGCG TCTGGTTGTT GAGTTTCCAG TGTAA
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Protein sequence | MSRPRRRGRD VHGVLLLDKP QGVSSNDVLQ KVKRIFNANR AGHTGALDPL ATGMLPICLG EATKFSQYLL DSDKRYRVIA RLGQRTDTSD ADGNVIEERA IGFSATDLEQ ALESFRGTTQ QVPSMYSALK YQGRKLYEYA RQGLTVPREA REITVYELQF IRWEGDELEL EIHCSKGTYI RTIIDDLGEK LGCGAHVIYL RRLQVAAYPT ERMVTLEQLA TLAEQAQTEE LALSLTLDPL LMPMESPVID FPEVNLPPVV AGYLKLGQAV QAAHAPLNGM VRITEGDAHK FIGMGEIDDD GRVAPRRLVV EFPV
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