Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0736 |
Symbol | |
ID | 8529102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 771165 |
End bp | 772061 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003258163 |
Protein GI | 261820057 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.54796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAGAG AACGAGCATT GACGCTGGAA GCCCTGAGGG TGATGGATGC GATCGATCGT CGTGGCAGCT TTGCCGCTGC GGCAGACGAG CTGGGTAGGG TGCCTTCGGC ACTGAGCTAT ACCATGCAGA AACTGGAAGA AGAGTTAGAT GTGGTGTTGT TCGATCGTTC TGGGCATCGT ACTAAATTCA CGAATGTCGG ACGAATGCTG TTGGAACGCG GACGTATCTT GCTGGAAGCT GCAGATAAGC TCACCACGGA TGCGGAAGCG CTGGCTCGCG GTTGGGAAAC TCACCTGACG ATTGTGACGG AAGCCCTGAT TCCAACTCAG CGAATTTTTC CCCTAATCGA TAAACTTGCG CTCAAAGCGA ATACGCAGGT ATCGATTCTG ACGGAAGTGC TGGCAGGGGC GTGGGAGCGT CTTGAACAAG GGCGTGCCGA TATCGTGATT GCGCCAGACA TGCATTTTCG TGCGTCTTCC GAAATGAACA CCCGCAAACT GTACACGATG AATAACGTTT ACGTCGCTAG CCCAGAGCAC CCTATTCATC AGGAGCCTGA GCCGCTGTCG GATGCGACTC GTGTGAAATA CCGTGGAATT GCCGTCGCGG ATACCGCGCG TGAACGTCCG GTGCTGACCG TGCAATTGCT GGATAAGCAG CAGCGTCTGA CGGTGAGTTC GTTAGATGAT AAACGGCGTG CGCTGCTGGC TGGGTTAGGT GTCGCAACCA TGCCTTACCC GATGGTGGCG CAGGATATTG CCGAAGGGCG TTTACTGGTG ATTGGGCCAG AACATCAAAT GGAAAGTCAG ATTATTATGG CGTGGCGACG AGACAGCATG GGCGAGGCGA AATCCTGGTT CCTGCGGGAA ATTCCCAAAT TGCTGAACCA ACCCTAA
|
Protein sequence | MARERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR TKFTNVGRML LERGRILLEA ADKLTTDAEA LARGWETHLT IVTEALIPTQ RIFPLIDKLA LKANTQVSIL TEVLAGAWER LEQGRADIVI APDMHFRASS EMNTRKLYTM NNVYVASPEH PIHQEPEPLS DATRVKYRGI AVADTARERP VLTVQLLDKQ QRLTVSSLDD KRRALLAGLG VATMPYPMVA QDIAEGRLLV IGPEHQMESQ IIMAWRRDSM GEAKSWFLRE IPKLLNQP
|
| |