Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0632 |
Symbol | |
ID | 8528997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 673818 |
End bp | 674345 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003258063 |
Protein GI | 261819957 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.23689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAATCA TGGCCAATGT GTTGCTGTTT ATCACTGTTA TCTTGCTGGC GTATTTCCCG GGCAACAGCG TTGCTCAGGG AAAAATGCCG GTGAAATATA CGGTGCAGCC CTGGTTGGCC TGTATTCACA CCGCGAGTGT GAAGTACGTC ATCGATTCAC TGCTGATTGA AGCGGTGATG GAGCAGGAAA GCAGCTTTAA TCCGCAAGCA GTCAACCGTA GCAACTCGGA TGGTAGTGCG GATTACGGTC TGATGATGGT TAACTCGGGG AATGTACCGA AACTGATCCG GGAGGGCATT ATCGCGACAG TGCAGGATTT GCTGGATAAG CCGTGCCTGA ATATTCAGAT TGGTACCCGA TTGTTGGCAT CCCATTTCCA GGTGTGTGGT GTGAGCTGGA ACTGCCTGGG CAGTTACAAT GCGGGGTTCG GTGATAAGCG CCACCGGCTG CGTGAGAAAT ACGCCAACCT CATCTGGGAA CGCTATAAAC GGTTGTTACG CGAACGACGG GGTATCGTAC TGAAATGA
|
Protein sequence | MIIMANVLLF ITVILLAYFP GNSVAQGKMP VKYTVQPWLA CIHTASVKYV IDSLLIEAVM EQESSFNPQA VNRSNSDGSA DYGLMMVNSG NVPKLIREGI IATVQDLLDK PCLNIQIGTR LLASHFQVCG VSWNCLGSYN AGFGDKRHRL REKYANLIWE RYKRLLRERR GIVLK
|
| |