| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0533 |
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| Symbol | |
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| ID | 8528897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 570784 |
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| End bp | 571158 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003257969 |
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| Protein GI | 261819863 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGCAAT GCCCCCAGAG CAACAGCGAA ACGTTCTGGG CGATGAACTA CAAACCGTTC
AAGTTCACCG TCGCGCTGAA CAAAGCGGTG CCGCTGATGT ACAACGCCCT CGCCTCCGGC
GAAATGCTGC CAACCGTCAC CCTGAAGTGG TATCGCACCT CGGTAGAAGG AAAACAGGAG
CACTTCTTCT CTACCGTGCT GACCGATGCC ACCATCGTTG ACGTTAACTG CCAGATGCCA
CACTGCCAGG ACCCGGCCAA GCTGGACTAC ACCCAACTGA TTGAAGTCTC GCTGGCCTAC
CGCAAAATCG ACTGGGAGCA CACCGTCGCC GGCACCTCCG GCTCTGACGA CTGGCGCGCG
CCGGTCGAAG CCTAA
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| Protein sequence | MRQCPQSNSE TFWAMNYKPF KFTVALNKAV PLMYNALASG EMLPTVTLKW YRTSVEGKQE
HFFSTVLTDA TIVDVNCQMP HCQDPAKLDY TQLIEVSLAY RKIDWEHTVA GTSGSDDWRA
PVEA
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