Gene Pecwa_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0398 
Symbol 
ID8528761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp430597 
End bp432168 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content57% 
IMG OID 
ProductCRISPR-associated protein, Cse1 family 
Protein accessionYP_003257848 
Protein GI261819742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000236732 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTTT CATTGATTGA AGAACCTTGG CTGCCCGCCG TATTTGCGGA TGGCCGAATG 
AGTAACATTT CCCCGCTGCA ACTCCCCGAT GACAATATTA TCGATCTCGC CTGGACGCGT
GCCGATTTTC AGGGGGCGAG CTATCAGTTG CTGATCGGTT TACTGCAAAC CGCCTATGCG
CCCGCCGATG ATGATGACTG GGATGCGATT TGGGAAGATG GTCTTGGCAC CGATTTCTCG
CAGGCGTTAG CCGCGCTAGC ACCGGCGATG CAGTTTGGTG CGCAGAAGCC CGCGTTTATG
CAGGATTGCG CCCCGCTCGA CAGCGACTCG ACGCCGATTT CCGGCCTGCT GATCGATGCC
CCCGGCGGCA ATACGCTCAA GCTGAATAAA GATCATTTTA TCAAGCGCGG TACGGTCAAC
GCGATATGCC CGCACTGTGC GGCAATGGCG CTATTCACGC TGCAAACCAA TGCGCCATCC
GGCGGGCAGG GGCACCGCAC CGGGATGCGC GGCGGTGGGC CGATCACCAC GCTGCTTATG
CAGGAAGACG GCAGGCTACC GCTGTGGAAA AAGCTTTGGA TGAACGTGTT AACGCAGAAA
GTGATGCCAA AGGGCAAGCC CGATGCCACG GTGTTCCCGT GGTTAGCGGC TACACCCACC
AGCGATGGTA CTCACCCGCC CGTGACGCAG GAAAATTCGC ATCAGCTACA GGCTTATTGG
GGCATGCCGC GTCGTATTGA GCTGGATTTC ACCACGTTAC AGACGGGGGA ATGCGATCTG
TGCGGTACGG AATCGACCGC GTTGCTCACG CAGTATCGCA CCAAAAACTA TGGCATCCAG
TACGATAGCT GGCGGCATCC GCTTACCCCT TATCGTCGGG CGCTGAAAGG CGACGATGCC
CCTTTTCTGT CGGTGAAAGG GCAGCCGGGC GGGCTGGCGT ACCGTGACTG GCTAGGGATG
ATGGTGTCAG TGGAAGATAA GCTCAACCAC ACCTATCCCG CCGCCGTTGT GCAGCACAAT
GCTGGCAAGC GGGCGCTGCG CAACGCGGGG TTATGGTGTT TTGGCTACGA CATGGACAAC
ATGAAGGCGC GTTGTTGGTA TGAACACCAC GTTCCGCTGC TGTTTTCCCC GGCTCGCTTC
CAGAGTGATG CGCTTTCGTT GCGGGAATAT AAAGATCACT TACAACTGGC GGTGGAGCTG
GCGCGGGACA GCGCCACGCT GCTGCGTCAA ATGATTAAGG AAGCCTGGTT CTCGCGTCCA
AAAGACGCAA AAGGGGATTT CAGCGCCATT GATGTCGCGT TCTGGCAGGA AACGCAGCCC
GATTTTATGC GGCTGTGCCG GTCGTTGGCG CAGGGTGATA CACCCGCGAC GGCGCTGAAT
ATCTGGAAAA AATCGCTCTA TCGCTACCTG TTGAATAACT ACGATGCCCG GGTGTTTAGC
AACCCGGATG AACACCGCGA TTTGGCTAAG GCGGCGAAAA CGCGGAAGAA GCTGAGCGCG
TTTTTCTATA AGCAAAAAGC GGCAGAAACC ATTAAACAAA TGCAGGAGGC AGTGGATGGC
GAACACGGCT GA
 
Protein sequence
MYFSLIEEPW LPAVFADGRM SNISPLQLPD DNIIDLAWTR ADFQGASYQL LIGLLQTAYA 
PADDDDWDAI WEDGLGTDFS QALAALAPAM QFGAQKPAFM QDCAPLDSDS TPISGLLIDA
PGGNTLKLNK DHFIKRGTVN AICPHCAAMA LFTLQTNAPS GGQGHRTGMR GGGPITTLLM
QEDGRLPLWK KLWMNVLTQK VMPKGKPDAT VFPWLAATPT SDGTHPPVTQ ENSHQLQAYW
GMPRRIELDF TTLQTGECDL CGTESTALLT QYRTKNYGIQ YDSWRHPLTP YRRALKGDDA
PFLSVKGQPG GLAYRDWLGM MVSVEDKLNH TYPAAVVQHN AGKRALRNAG LWCFGYDMDN
MKARCWYEHH VPLLFSPARF QSDALSLREY KDHLQLAVEL ARDSATLLRQ MIKEAWFSRP
KDAKGDFSAI DVAFWQETQP DFMRLCRSLA QGDTPATALN IWKKSLYRYL LNNYDARVFS
NPDEHRDLAK AAKTRKKLSA FFYKQKAAET IKQMQEAVDG EHG