Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0383 |
Symbol | |
ID | 8528746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 410455 |
End bp | 411114 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | SNARE associated Golgi protein-related protein |
Protein accession | YP_003257833 |
Protein GI | 261819727 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATGG TTCACGACAT TATTCAGGCG CTCTGGCAGC AGGATTTTAG TGCACTGGCC GATCCCCACG TCATTTGGGT AATTTACGGT ATTCTGTTCA CAACGCTGTT TCTGGAGAAC GGCCTGCTAC CGGCCTCTTT TCTGCCCGGC GATAGCCTAC TGCTGCTCAC CGGAGCCATG ATTGCCAAAG GCGTGATGAG CTTTTTCCCC ACAATGATTC TGCTTACCAT CGCCGCCAGT CTCGGCTGTT GGCTCAGTTA TCTGCAAGGG CGCTGGCTGA GCGATACCCG ATTAGTAAAA GGCTGGCTGT TGCAACTTCC TGCACATTAC CACCAGCGCG CCCATCACCT GTTCCATCGC CACGGCCTGA CGGCGCTGCT GGTGGGGCGA TTTTTAGCCT TTATCCGCAC GTTACTGCCA ACGATGGCGG GAATTTCTGG GTTAAATAAT ACGCGTTTTC AAATTTTCAA CTGGCTTAGC GGGCTGCTGT GGGTCGGCGG GATCGTCACG CTCGGCTATG CGCTTAGCCA CATTCCGCTG GTCAAACGCT ATGAAGATCA GGTGATGACC GCGCTGATCC TGCTGCCTAT TATTTTACTG GTCAGCGGCC TTATCGGCAT GGCTGTTGTG GTGTGGCGTA AAAAACGGAC GGTCGCCTAA
|
Protein sequence | MSMVHDIIQA LWQQDFSALA DPHVIWVIYG ILFTTLFLEN GLLPASFLPG DSLLLLTGAM IAKGVMSFFP TMILLTIAAS LGCWLSYLQG RWLSDTRLVK GWLLQLPAHY HQRAHHLFHR HGLTALLVGR FLAFIRTLLP TMAGISGLNN TRFQIFNWLS GLLWVGGIVT LGYALSHIPL VKRYEDQVMT ALILLPIILL VSGLIGMAVV VWRKKRTVA
|
| |