Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0323 |
Symbol | tolC |
ID | 8528686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 358585 |
End bp | 359976 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | outer membrane channel protein |
Protein accession | YP_003257783 |
Protein GI | 261819677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000673159 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TGCTCCCTCT TCTTATTGGT CTGAGCCTGG GCGGTTTTAG CGCCATGAGC CAGGCTGAAA ACCTGTTACA GGTCTACCAA CAGGCAAAAA GCACCAACCC TGATTTACGC AGCACTGCGG CAACACGAGA CGCCGCGTTT GAAAAAATCA ACGAAGCACG CAGCACGTTA CTGCCGCAGT TGGGGATCAA CGCAGAGTAT ACCTATAACA AGGGTTACCG TGACAGTAAC GGCGTCAATA ACAATGAGAA AAGCGCGTCA TTACAACTGA CCCAAACGCT GTTCGACATG TCGAGATGGC GTGCGCTGAC GCTGCAGGAA AAACAAGCCG GTATCGAGGA TGTCGTGTAC CAGACGGCGC AGCAAAATCT GATGCTGAAC ACAGCGACCG CCTATTTCAA TGTGCTGCGC GCGATTGACT CATTGTCCTA TATCAGCGCT CAGAAACAGG CAATTTATCG TCAGTTAGAC CAGACGACAC AGCGCTTCAA CGTGGGTCTG GTTGCGATTA CCGACGTCCA GAACGCCCGG GCACAGTATG ACAGCGTACT GGCCAATGAG GTTCTGACGC GTAATACGCT GGACAATGCC CTGGAATCAC TGCGCCAGAT TACCGGCAAT TTCTACCCAC AGCTTGCTGG CCTGAACATC ACGCATTTTT CTACTCAGAA ACCCGAAGCC GTCAACAATC TGTTAAAAGA AGCGGAAAAC CGCAACCTGA ACCTGTTGTC CGCACGTTTG AGTCAGGATT TGGCCCGTGA GCAAATTCGC TCATCCGAAA CCGGCTATAT GCCGACACTA GGACTCACCG CATCGACGGG CGTAAGCGAT ACCCGTTATT CCGGCTCACG GACGAATAGC GGCAACTTCA ACGACACCGA CGCTGGGCAA CACAGAGTCG GCATCAACTT TACGCTCCCG CTGTACAACG GTGGTATCAC CAACTCTCAG GTCAAGCAGG CACAGCACAG CTATGTCAGC GCCAGTGAGC AGCTAGAAAG TGCGCACCGT TCAGTGATCC AAGTTGTCCG TTCATCGTTC AACAACATCT CTGCTTCCAT CAGCAGCATC AACGCTTACA AGCAGGCTGA AGTGTCTGCA CAAAGCTCTC TGGATGCGAT GGAAGCGGGT TATCAGGTAG GGACGCGTAC CATCGTTGAC GTACTGGATG CTACCACCAC GTTGTATAAC GCCAAACAGC AACTCTCCAG CGCGCGTTAT GATTATCTGA TCAACCAGTT AAACATTAAA TCCGCGCAGG GAACGCTGAA TGAAAGCGAT CTGCAAGCGC TGAATGCGTC GCTGGGCCAA CCGGTGTCAA CCACGCCGAC CATAACGGAC GACAGCGCTC CGCAGACGAC GACCGCCTCG GCGCAGCGTT AA
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Protein sequence | MKKLLPLLIG LSLGGFSAMS QAENLLQVYQ QAKSTNPDLR STAATRDAAF EKINEARSTL LPQLGINAEY TYNKGYRDSN GVNNNEKSAS LQLTQTLFDM SRWRALTLQE KQAGIEDVVY QTAQQNLMLN TATAYFNVLR AIDSLSYISA QKQAIYRQLD QTTQRFNVGL VAITDVQNAR AQYDSVLANE VLTRNTLDNA LESLRQITGN FYPQLAGLNI THFSTQKPEA VNNLLKEAEN RNLNLLSARL SQDLAREQIR SSETGYMPTL GLTASTGVSD TRYSGSRTNS GNFNDTDAGQ HRVGINFTLP LYNGGITNSQ VKQAQHSYVS ASEQLESAHR SVIQVVRSSF NNISASISSI NAYKQAEVSA QSSLDAMEAG YQVGTRTIVD VLDATTTLYN AKQQLSSARY DYLINQLNIK SAQGTLNESD LQALNASLGQ PVSTTPTITD DSAPQTTTAS AQR
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