Gene Pecwa_0289 details

Gene Information

• Locus tag: Pecwa_0289
• ID: 8528651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 322120
• End bp: 322902
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 58%
• Product: protein of unknown function DUF140
• Protein accession: YP_003257749
• Protein GI: 261819643

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.16381
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTATTAC GGACGTTGGC GTCGCTAGGG CGTCAGGGGA TCTCCGCCAG TGCTGCGTTT 
GGGCGCGCTG GGCTGATGCT GTTTAATGCG CTAGTGGGTA AGCCCGAATT CAGAAAACAG 
TGGCCGCTGT TGGTGAAACA ACTTTACAGC GTTGGCGTGC AATCACTGCT TATCATCATG 
GTTTCCGGTC TGTTTATCGG TATGGTGCTG GGGTTACAGG GCTATATCAT CCTGACGACG 
TACAGCGCTG AAGCCAGTTT GGGCATGATG GTGGCGCTGT CGTTGCTGCG TGAACTTGGC 
CCGGTGGTGA CGGCGCTGCT GTTCGCCGGG CGTGCGGGTT CCGCGCTGAC GGCGGAAATC 
GGGCTGATGA AGGCAACCGA GCAGCTCTCC AGCATGGAGA TGATGGCGGT CGATCCGCTG 
CGCCGCGTTG TCGCACCGCG CTTTTGGGCG GGGTTAATTA GCATGCCGCT GTTGGCGGTG 
ATTTTTGTCG CCGTGGGGAT CTGGGGGGGC GCGTTGGTCG GTGTGGACTG GAAAGGTATC 
GACAGCGGGT TCTTCTGGTC TGCCATGCAG GGCGCGGTTG ACTGGCGTCA GGATGTGCTG 
AACTGCGTGA TTAAAAGTAT CGTATTTGCG ATTACCGTGA CCTGGATTGC ACTGTTTAAC 
GGCTATGACG CGATCCCGAC GTCTGAGGGG ATCAGCCGTG CAACGACGCG AACCGTCGTG 
CACTCGTCGT TAGCGGTACT GGGATTGGAT TTTGTGCTGA CAGCACTGAT GTTTGGGAAC 
TGA 

 

Protein sequence

MLLRTLASLG RQGISASAAF GRAGLMLFNA LVGKPEFRKQ WPLLVKQLYS VGVQSLLIIM 
VSGLFIGMVL GLQGYIILTT YSAEASLGMM VALSLLRELG PVVTALLFAG RAGSALTAEI 
GLMKATEQLS SMEMMAVDPL RRVVAPRFWA GLISMPLLAV IFVAVGIWGG ALVGVDWKGI 
DSGFFWSAMQ GAVDWRQDVL NCVIKSIVFA ITVTWIALFN GYDAIPTSEG ISRATTRTVV 
HSSLAVLGLD FVLTALMFGN