| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0281 |
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| Symbol | |
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| ID | 8528643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 314955 |
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| End bp | 316388 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_003257741 |
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| Protein GI | 261819635 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAG GTTTGCAACT CAGGCTTAGC CAGCAACTGG CCATGACTCC ACAGCTCCAA
CAGGCAATTC GGCTGTTGCA GTTGTCCACG CTTGAATTGC AACAGGAGAT TCAACTGGCG
CTGGAAAGCA ATCCGTTGCT CGAGCAAACG GATCAGCACG ACGAAATCGA GTCATTCGAA
AAGGCAGACA GCGATTCACT GGATACCGGT GAAGCCCTTG AACAACGGGA TATGCCGGAA
GAATTGCCGC TCGACGCCAC CTGGGATGAG ATTTATTCCG CAGGCACACC GTCGGGCACG
GGTTCTGACT ATCGCGACGA AGAACTGCCC ATTTATCAAG GCGAAACCAC GCAAACGCTT
CAGGATTACC TGATGTGGCA GGTTGAGCTG ACGCCGTTTT CAGATACTGA TGCGGCCATC
GCAACGTCGA TTGTTGATGC GGTGGACAAC ACCGGCTACC TTACCGTGCC GCTGGAAGAC
ATTCTTGACA GCATCGGTGA CGACGACGTG ACGCTGGAAG AGGTCGAAGC CGTACTTAAA
CGCGTGCAGC GCTTTGATCC CGTTGGCGTC GCCGCTCGCG ATCTGCGTGA TTGCCTACTG
GTACAGCTTT CTCAGTTTGA CAACCGTACA CCACGCTTGC TCGAAGCTCG CCTGATCGTC
AGCGATCATC TCGATCTGTT AGCCAATCAT GATTTCCGTA GCCTGATCCG CGTGACCCGT
CTGAAAGAGG AAGTGCTGAA AGAAGCGCTG GCGCTGATCC AATCGCTCGA TCCACGTCCG
GGGCAGTCAA TTAACACCGG TGAATCCGAA TATGTGATCC CTGATGTGCT GGTGCGCAAG
ATACAGGGCG TGTGGGTCGT TGAATTGAAC ACCGACAGCG TCCCCCGTTT GCAGATTAAC
CAACAATATG CAGCACTGGG TAACAGCGCG CGCAACGACA GCGACGGGCA ATTTATCCGT
AGTAACCTGC AAGAAGCACG CTGGCTCATC AAAAGTCTGG AAAGTCGCAA CGATACGCTG
CTGAAAGTAA CCCGTCGCAT CGTCGAGCAG CAGCAGGATT TCTTCGAGCA GGGTGAAGAA
TTCATGAAGC CCATGGTATT GGCAGACATC GCCCAAGCGG TAGATATGCA TGAATCCACC
ATCTCACGCG TGACAACACA GAAGTTCCTG CACAGCCCAC GCGGCATTTT TGAGCTAAAA
TATTTCTTCT CCAGCCACGT TAATACCGAT AGCGGCGGAG AAGCTTCGTC AACGGCTATC
CGCGCGCTGG TGAAAAAGCT TATTGCAGCG GAAAACCCTG CGAAGCCATT AAGTGACAGC
AAGCTCACCA CGCTGCTCTC CGAGCAGGGC ATCATCGTGG CACGCCGTAC CGTCGCAAAA
TACCGAGAGT CTTTATCTAT CCCACCATCA AATCAGCGTA AACAACTGAT TTGA
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| Protein sequence | MKQGLQLRLS QQLAMTPQLQ QAIRLLQLST LELQQEIQLA LESNPLLEQT DQHDEIESFE
KADSDSLDTG EALEQRDMPE ELPLDATWDE IYSAGTPSGT GSDYRDEELP IYQGETTQTL
QDYLMWQVEL TPFSDTDAAI ATSIVDAVDN TGYLTVPLED ILDSIGDDDV TLEEVEAVLK
RVQRFDPVGV AARDLRDCLL VQLSQFDNRT PRLLEARLIV SDHLDLLANH DFRSLIRVTR
LKEEVLKEAL ALIQSLDPRP GQSINTGESE YVIPDVLVRK IQGVWVVELN TDSVPRLQIN
QQYAALGNSA RNDSDGQFIR SNLQEARWLI KSLESRNDTL LKVTRRIVEQ QQDFFEQGEE
FMKPMVLADI AQAVDMHEST ISRVTTQKFL HSPRGIFELK YFFSSHVNTD SGGEASSTAI
RALVKKLIAA ENPAKPLSDS KLTTLLSEQG IIVARRTVAK YRESLSIPPS NQRKQLI
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