| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0229 |
|---|
| Symbol | purH |
|---|
| ID | 8528587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 255474 |
|---|
| End bp | 257063 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_003257691 |
|---|
| Protein GI | 261819585 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00104453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAC GTCGTCCAAT TCGCCGCGCT CTGCTCAGCG TTTCTGACAA AGCAGGTATT
GTCGAATTTG CTCAAGCTCT GTCCCTCCGT GGCGTCGAGC TCCTTTCAAC GGGCGGAACC
GCCCGTTTGC TGGCTGATGC TGGCTTAGCC GTGACAGAAG TCTCCGACTA CACCGGTTTC
CCGGAAATGA TGGATGGGCG AGTAAAGACC CTGCACCCGA AAGTACACGG CGGCATTCTG
GGACGGCGCG ATCAGGATGA TGCGATCATG GCGCAGCACG ACATCAAGCC GATCGATATC
GTTGTTGTGA ACCTGTACCC GTTTGCTCAG ACCGTCGCCC GTGAGAACTG CACGTTAGAA
GATGCCGTTG AGAACATCGA TATCGGTGGC CCGACGATGG TACGCTCCGC CGCCAAGAAC
CATAAAGACG TCGCTATCGT GGTTAAGAGC AGTGACTACA ACACTATTAT TAATGAAATC
GACGCCAACG AAGGTTCATT GACCTACGAA ACCCGTTTCG ATTTAGCCAT TAAAGCCTTC
GAACACACCG CCGCATATGA CAGTATGATT GCCAACTACT TTGGCGCACT GGTTCCGCCT
TACCACGGTG ATACCGATAA GCCATCTGGC CACTTCCCGC GCACGTTGAA TCTGAACTAT
ATCAAAAAGC AGGACATGCG CTACGGCGAG AACAGCCATC AGCAAGCGGC CTTCTATATA
GAAGAGAATA TTCGCGAGGC CTCGGTCGCC ACTTCTATAC AGTTACAAGG CAAGGCGCTG
TCTTATAACA ACATCGCCGA TACCGATGCT GCACTGGAGT GTGTGAAGGA ATTTGCCGAG
CCAGCCTGCG TTATCGTTAA ACACGCGAAT CCGTGTGGCG TAGCCATTGG CGGCTCAATT
CTTGATGCCT ACGAACGCGC CTATAAAACT GACCCGACAT CCGCATTCGG CGGCATTATC
GCCTTCAACC GCGAACTGGA TGAAGAAACG GCACAGGCCA TCATCAGCCG TCAGTTTGTC
GAAGTCATTA TTGCGCCATC CGCCAGCGAA GCTGCTTTGA AGGTTACCGC AGCCAAACAA
AACGTGCGTG TCCTGACCAG CGGTAGCTGG CAGCAACGCG TTCCGGCTCT GGACTTCAAA
CGCGTCAACG GCGGTTTGTT GGTACAGGAT CGCGATTTGG GTATGGTCGA TGCGTCTCAA
CTGCGTGTCG TGACCGAGCG CCAGCCGAGC GAGCAGGAAT TACGCGATGC CCTCTTCTGC
TGGAAAGTGG CTAAATTCGT TAAATCCAAT GCGATTGTGT ACGCACGTGA CAACATGACC
ATCGGGATAG GTGCCGGTCA GATGAGCCGC GTTTACTCCG CGAAAATCGC CGGAATCAAA
GCGGGCGATG AAGGGCTGGA AGTCAAAGGT TCCGCCATGG CCTCCGATGC ATTCTTCCCA
TTCCGCGATG GTATTGATGC CGCCGCTGCC GTTGGCATTA CCTGCGTGAT CCAACCGGGC
GGCTCTATCC GTGATGATGA AGTCATTGCC GCCGCCAACG AACACGGCAT TGCGATGATC
TTTACCGACA TGCGCCACTT CCGCCATTAA
|
|---|
| Protein sequence | MQQRRPIRRA LLSVSDKAGI VEFAQALSLR GVELLSTGGT ARLLADAGLA VTEVSDYTGF
PEMMDGRVKT LHPKVHGGIL GRRDQDDAIM AQHDIKPIDI VVVNLYPFAQ TVARENCTLE
DAVENIDIGG PTMVRSAAKN HKDVAIVVKS SDYNTIINEI DANEGSLTYE TRFDLAIKAF
EHTAAYDSMI ANYFGALVPP YHGDTDKPSG HFPRTLNLNY IKKQDMRYGE NSHQQAAFYI
EENIREASVA TSIQLQGKAL SYNNIADTDA ALECVKEFAE PACVIVKHAN PCGVAIGGSI
LDAYERAYKT DPTSAFGGII AFNRELDEET AQAIISRQFV EVIIAPSASE AALKVTAAKQ
NVRVLTSGSW QQRVPALDFK RVNGGLLVQD RDLGMVDASQ LRVVTERQPS EQELRDALFC
WKVAKFVKSN AIVYARDNMT IGIGAGQMSR VYSAKIAGIK AGDEGLEVKG SAMASDAFFP
FRDGIDAAAA VGITCVIQPG GSIRDDEVIA AANEHGIAMI FTDMRHFRH
|
|---|
| |