Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0178 |
Symbol | |
ID | 8528528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 190718 |
End bp | 191635 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
Protein accession | YP_003257640 |
Protein GI | 261819534 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.847771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTTAT CGACCCATAA CAGCAAAACC AAAGCCTGGC TGGATAGTCT GCGTCCAAAA ACGTTGCCAT TAGCTTTTGC ATCTATCGTC ACCGGCTCGG CAATTGCGAG TTGGCACAGC AACTTTAAAC CGGGCGTAGC ATTATTGGCG TTGATAACCG CCGGGCTGCT GCAAATCCTC TCCAATCTGG CGAACGACTA TGGGGATGCG ATAAAAGGCA GCGATACCGA GGAACGCATC GGGCCGTTGC GCGGTATCCA GACTGGTGTC ATTACACTGT CGCAACTTCG CAATGCGCTC ATCGTGACCG TGGCCCTCAC GATCATTTCC GGCGTGAGTC TGGTGATCCT GGCATGTGAA AAACCAGCGG ATATCTTTGG CTTCCTGATT CTGGGGCTGT TAGCGATTTT CGCCGCGATC ACCTATACCG TCGGCAACAA ACCCTATGGC TATATCGGGC TTGGCGATAT CTCAGTGCTA ATCTTTTTCG GCTGGCTCAG CGTAGCAGGG TCGTATTATC TGCAAACTGG CCACTTCGAC AGCGTCGTGA TGCTGCCGGC AACGGCCTGC GGCCTGCTGG CGACAGCGGT ACTGAATATC AACAATCTGC GCGATATCGA CAACGATCGC ATTAGCGGAA AAAATACGCT GGCGGTGCGT CTCGGGGCGG AAAAAGCGCG CTTCTACCAC ACGATGCTGC TGCTACTGGC ACCAGTTTGT CTTGGCCTGT TCGCGGCATT TTATCTGCAC AGTCTGGCTG GCTGGCTGTT TATTCTGGCA CTCCCGCTGC TGATTAAGCA GGCGCGCTAT GTACTACGTG AAACCAGCGC ATTCAGTATG CGTCCGATGT TGGAAAAAAC GGTAAAAGGC GCGCTGCTGA CCAACATTCT GTTCGCCGTA GGTGTGATAC TGAGCTAA
|
Protein sequence | MTLSTHNSKT KAWLDSLRPK TLPLAFASIV TGSAIASWHS NFKPGVALLA LITAGLLQIL SNLANDYGDA IKGSDTEERI GPLRGIQTGV ITLSQLRNAL IVTVALTIIS GVSLVILACE KPADIFGFLI LGLLAIFAAI TYTVGNKPYG YIGLGDISVL IFFGWLSVAG SYYLQTGHFD SVVMLPATAC GLLATAVLNI NNLRDIDNDR ISGKNTLAVR LGAEKARFYH TMLLLLAPVC LGLFAAFYLH SLAGWLFILA LPLLIKQARY VLRETSAFSM RPMLEKTVKG ALLTNILFAV GVILS
|
| |