Gene Pecwa_0113 details

Gene Information

• Locus tag: Pecwa_0113
• ID: 8528463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 133548
• End bp: 134309
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 57%
• Product: transcriptional regulator, DeoR family
• Protein accession: YP_003257588
• Protein GI: 261819482

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTCCAG TAGAACGTCA TCAACAGATT ATGGCGCTGA TCGCCGAGCG TGGCGCAGTG 
AGCATTAACG AACTGACCGA GCGGCTGGGC GTGTCGCACA TGACGGTGCG GCGCGATGTG 
CAAAAACTGG AGCAGGACGG TTTGCTGCTG AGCGTCTCCG GCGGCGTGCG CTCGCCCGAA 
CGTCTGGCGA TTGAGCCATC GCATCAGGAT AAATCTGTGA TGTTCAGCCA GCAGAAAGAA 
GCGATGGGTA AACTGGCGGC ACAGCATATT CCGCTCAATA GCTGCATTTA TCTGGATGCG 
GGAACCACGA CGTTATCACT GGCGCGCGAA CTGGCTGAGC GCGACGACCT TCTGATTGTC 
ACTAATGATT TTGCTATCGC GGCTTTTCTG ATTGAGTCCA GCCAGTGCCG CATGATCCAC 
ACCGGCGGCA CGCTGTGTCG GGAAAATCGT TCCTGCATTG GTGAAGCGGT GGCGCAGGCG 
CTGCGCAACC TGTTTATCGA CATCGCGTTT ATCTCTGCCT CGTCATGGAG CCTGCGCGGG 
TTGTCCACGC CCAACGAAGA CAAAGTGGTG GTGAAACGTG CGGCGGTGGA AGCCAGCAGA 
AAACGCGTAC TGCTGTGTGA CACTTCAAAA TATGGCCGCA TCGCCACCCA TCTCGCCACG 
CCGCTTAGCG TATTCGACAG CATCATCACA GACGCTGGTC TACCGGCTGC TGCTAAAGAA 
GCCTTGGGTA AAATGGGAGT TGAAGTGCTC ATGGCGGGGT GA 

 

Protein sequence

MIPVERHQQI MALIAERGAV SINELTERLG VSHMTVRRDV QKLEQDGLLL SVSGGVRSPE 
RLAIEPSHQD KSVMFSQQKE AMGKLAAQHI PLNSCIYLDA GTTTLSLARE LAERDDLLIV 
TNDFAIAAFL IESSQCRMIH TGGTLCRENR SCIGEAVAQA LRNLFIDIAF ISASSWSLRG 
LSTPNEDKVV VKRAAVEASR KRVLLCDTSK YGRIATHLAT PLSVFDSIIT DAGLPAAAKE 
ALGKMGVEVL MAG