Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0108 |
Symbol | |
ID | 8528458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 128037 |
End bp | 129395 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | inner membrane permease YgbN |
Protein accession | YP_003257583 |
Protein GI | 261819477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCT CGCTCTTACT CTGCATCGCT ATCGCCGGGG TATTACTCCT GCTACTGATG GTCATTAAAT TTAAAATTCA GCCTTTTGTC GCCCTGCTGG TCGTCAGCTT ACTTGTCGCG TTGGCAACTG GTATTCCCAC TAATGAAATC ATGAAGGTTA TGACATCCGG CATGGGCGGC GTACTAGGTT CAGTCGCAAT TATTATCGGC CTCGGAGCCA TGCTCGGCAG AATGATCGAA GTGTCCGGCG GCGCAGAATC CTTAGCACAC CGTTTTGCCC AATTAATGGG GCCAGGATTA ATGGTGGCAG CCCTAACGGT TTCTGCCTTT ATTTTGGGGA TTCCGGTCTT TTTCGATGTC GGCTTTATTA TCCTCGCCCC GATTATTTAC GGCTTTGCGA AGGTCGCAAA AGTCTCTCCG ATTAAATTTG GTTTGCCCGT TGCGGGCGTG ATGCTGACGG TACACGTCGC GCTGCCGCCC CACCCCGGCC CGGTCGCTGC CGCTGGCCTG TTGAATGCGG ATATCGGCTG GCTGACCATC ATTGGCCTGC TGGTGTCAAT TCCGGTCGGT CTTATCAGCT ACTGGGTTGC CAAAGCGATG AACCGCCGTA AATATGCGCT TTCCATCGAG GTACTGGAAC AACTCCAGTT GGCGAAACCA GAAGATGCCA CACCGGGTAC TGCCCCTGTT GCTGCGCCCT CTGCCGGATT GATTGCCGCA CTGATTGTCA TCCCGATTGC CATTATTATG CTCGGCACCG TATCCGCAAC CTTGTTGCCT GCCGGACATC CCGTGCGTAA CGTGATGTCG CTGGTTGGAT CTCCCGCCGT GGCGCTGCTG ATTGCACTGG CATTAGCGTT CTGGCTGATC GCTCTGCGCC GCGGCTGGTC GCTGGAAAAA GCCAGCGGTG TCATGGGCGA TGCCATGCCT GCCGCTGCCG TCGTCATTAT GGTGACCGGT GCCGGTGGTG TGTTCGGCAA GGTGCTGGTG GAGTCAGGCA TTGGTAAAGC GCTGGCGGAT ACGCTGACCA GCATTCATCT GCCGCTGGTG CCTGCCGCGT TTCTTCTGTC GTTGGCGCTG CGTGCCTCAC AAGGTTCTGC CACCGTCGCC ATTCTCACCA CCTGTGGCCT GCTGAGCGAA GCCGTCAGCG GCCTGAACCA GATGCAGTTG GTGCTAGTGA CGCTCTCTGC CTGCTTTGGT GGGCTGGGCC TGTCGCACGT TAATGACTCC GGTTTCTGGA TCGTCACCAA ATATCTGGGG CTATCCGTCG CCGATGGCCT GCGCACATGG ACGGTGTTAA CCACTCTTCT CGGGCTGGCC GGGTTCCTCT TTACCTGGGC GCTTTGGCTG GTCATGTAA
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Protein sequence | MATSLLLCIA IAGVLLLLLM VIKFKIQPFV ALLVVSLLVA LATGIPTNEI MKVMTSGMGG VLGSVAIIIG LGAMLGRMIE VSGGAESLAH RFAQLMGPGL MVAALTVSAF ILGIPVFFDV GFIILAPIIY GFAKVAKVSP IKFGLPVAGV MLTVHVALPP HPGPVAAAGL LNADIGWLTI IGLLVSIPVG LISYWVAKAM NRRKYALSIE VLEQLQLAKP EDATPGTAPV AAPSAGLIAA LIVIPIAIIM LGTVSATLLP AGHPVRNVMS LVGSPAVALL IALALAFWLI ALRRGWSLEK ASGVMGDAMP AAAVVIMVTG AGGVFGKVLV ESGIGKALAD TLTSIHLPLV PAAFLLSLAL RASQGSATVA ILTTCGLLSE AVSGLNQMQL VLVTLSACFG GLGLSHVNDS GFWIVTKYLG LSVADGLRTW TVLTTLLGLA GFLFTWALWL VM
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