Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0100 |
Symbol | livM |
ID | 8528450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 115358 |
End bp | 116632 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | leucine/isoleucine/valine transporter permease subunit |
Protein accession | YP_003257575 |
Protein GI | 261819469 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC TCAACCTGTT TAATGCGTTA GTTTCCGCGT TCATGCTGCT GGTGCTGGCC TCGTTTTTAA TGGGCATGCA ACTGGCGCTG GATGGCACCA AACTGGTAGT GCGCGGTGCC GATGAAGTTC GCTGGTATTG GATTGGTGCG GGCTGCATCG TGGTGTTCTT CTTTCAATTG ATCCGCCCGT TCTTCCAGCA AAGCATCAAG AAATTTTCCG CACCGTCTCT GGTGCTGCCC AGCTTTGATG GCAGTACGCC ACGGCAGAAG GTATTGGCTG CCGCGTTGAT TATCGCCGCT ATTGCCTGGC CGTTTCTGGT CTCGCGCGGT ACGGTGGATA TTGCCACCCT CACATTGATT TACGTGATGC TGGGTCTGGG CTTGAACGTC GTCGTGGGGC TGTCCGGTCT GCTGGTGTTG GGCTACGGCG GGTTTTACGC CATTGGCGCG TATACTTATG CCTTGCTGAA CCACTATTAC GGATTGGGTT TCTGGGAAAG TTTGCCGCTG GCGGGCATGG CGGCGGCGCT GTCCGGCTTC CTGCTGGGGT TCCCGGTGCT GCGTTTACGC GGCGACTATC TGGCGATTGT GACGCTCGGG TTCGGCGAAA TTGTCCGTAT CCTGTTGCTG AACAATACCG AAATTACCGG TGGCCCGAAC GGCATCAGCC AGATCCCTAA ACCGACCTTC TTGGGTCTGG AATTTGGCCG CAGCGCGCGC GATGGCGGTT GGGATACGTT CCATAATTTC TTCGGTCTGC AATATGACCC CAGCGATCGC GTCATCTTCC TGTATCTGGT CGCGCTGCTG TTGGTCATAT TAACCCTGTT TGTGATTAAT CGTCTGCTGC GGATGCCGCT GGGCCGCGCC TGGGAAGCGC TACGCGATGA TGAGATCGCC TGTCGTTCTC TGGGGCTGAG CCCAACGCGC ATCAAGCTGA CCGCCTTTAC CATCAGCGCC GCATTCGCTG GGTTCGCGGG TACGCTGTTT GCCGCGCGTC AAGGCTTTGT CAGCCCGGAA TCGTTCACGT TTGCTGAGTC GGCCTTTGTG CTGGCCATCG TTGTGCTGGG TGGCATGGGC TCGCAGTTTG CGGTCATTCT CGCTGCGATC CTGCTGGTCG TGTCTCGCGA GCTGATGCGT GACCTGAATG AATACAGCAT GCTGTTGCTG GGTGCATTGA TGGTTCTGAT GATGATTTGG CGTCCGCAAG GCTTGCTGCC GATGACGCGT CCTGAGATGA AGTTGAAAGT CGCGAAGAAG GAAGAGCAAG CATGA
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Protein sequence | MKQLNLFNAL VSAFMLLVLA SFLMGMQLAL DGTKLVVRGA DEVRWYWIGA GCIVVFFFQL IRPFFQQSIK KFSAPSLVLP SFDGSTPRQK VLAAALIIAA IAWPFLVSRG TVDIATLTLI YVMLGLGLNV VVGLSGLLVL GYGGFYAIGA YTYALLNHYY GLGFWESLPL AGMAAALSGF LLGFPVLRLR GDYLAIVTLG FGEIVRILLL NNTEITGGPN GISQIPKPTF LGLEFGRSAR DGGWDTFHNF FGLQYDPSDR VIFLYLVALL LVILTLFVIN RLLRMPLGRA WEALRDDEIA CRSLGLSPTR IKLTAFTISA AFAGFAGTLF AARQGFVSPE SFTFAESAFV LAIVVLGGMG SQFAVILAAI LLVVSRELMR DLNEYSMLLL GALMVLMMIW RPQGLLPMTR PEMKLKVAKK EEQA
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