Gene Pecwa_0092 details

Gene Information

• Locus tag: Pecwa_0092
• Symbol: rsmD
• ID: 8528442
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 107081
• End bp: 107656
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 57%
• Product: 16S rRNA m(2)G966-methyltransferase
• Protein accession: YP_003257567
• Protein GI: 261819461

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAA AAAATGCATC GTCAGCCGCC GGACAAATCC GAATCATCGG TGGTCAATGG 
CGCGGCAGAA AACTCCCGGT TCCTGATAGC CCCGGTTTAC GTCCCACGAC CGATCGCGTG 
CGGGAAACGC TGTTTAACTG GCTAGCCCCC GTCATTCAGC AGGCGCGCTG TCTGGACTGC 
TTTGCCGGTA GCGGTGCGCT CGGGCTGGAA GCGCTGTCTC GTTATGCGGC TCATGCCACA 
TTATTGGAGA TGGAGCGTGC AGTCGCCCAG CAATTAACGC AAAATCTGGC ACTGCTTCGG 
GCGGAAAACG CTGAGGTGGT CAATACTGAT GCCCTGAGCT GGCTGGCGAA GCCGGGTACT 
CCGTTTGACG TCGTGTTTCT CGATCCGCCG TTCCGCAAAG AACTGCTGAA CAACACGCTT 
GCTCTGCTGG AACAACAGGG CTGGCTGGCA CCAGACGCGT GGATTTACGT GGAAACAGAG 
GCGGAAAATG CGCAACTGAC CATCCCGGAG AATTGGCAAC TGCACCGTGA AAAAATTGCG 
GGTCAGGTCG CCTACCGTTT GTATATCCGT CAGTGA 

 

Protein sequence

MAKKNASSAA GQIRIIGGQW RGRKLPVPDS PGLRPTTDRV RETLFNWLAP VIQQARCLDC 
FAGSGALGLE ALSRYAAHAT LLEMERAVAQ QLTQNLALLR AENAEVVNTD ALSWLAKPGT 
PFDVVFLDPP FRKELLNNTL ALLEQQGWLA PDAWIYVETE AENAQLTIPE NWQLHREKIA 
GQVAYRLYIR Q