Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0022 |
Symbol | |
ID | 8528372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 26772 |
End bp | 27470 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | GntR domain protein |
Protein accession | YP_003257498 |
Protein GI | 261819392 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC AAGAATTAAG CAAAACCGAC CGCATCATTC TGGATATTGG CCAACAGATC GTGGGTGGGA AGTACGCTCC GGGCACGCCG TTACCCGCAG AAGCTGAGCT GTGTGAAGAA TTTCAGACCT CGCGCAACAT TATTCGTGAG GTGTTCAGAG CGCTGATGGC GAAAAGGCTG GTGGAAGTGA AACGGTATCG CGGCGCGTTT GTGGCCGCGC GTAACCAGTG GAATTATCTG GATACCGACG TTCTGCAGTG GGTTCTGGCA AGCGACTACG ACCCACGGCT GATCAGCGCG ATGAGTGAGG TGCGTAATCT GGTGGAGCCG ACGATTGCTC GCTGGGCTGC CGAACGCGCG ACCTCAAGTG AGCTGGCGGT GATTGAAGCG GCGCTGAATG ACATGATTTC CAACCATCAG AATCGTGACG CGTTTAATGA AGCAGATATT CGCTTCCATG AGGCGGTGCT TGCTGCGGTG CATAACCCGG TGCTACAGCA GTTGAGTGTT GCGATTAGCT CGTTACAGCG TGCGGTATTT GAACGCACCT ATATGCCGGA CGAAGACAAC ATGCCACGGA CATTACGTGA GCATCAGGAT CTCTACGATG CCATTCGGCA TCAGGATATT GAAGCAGCGG AGCGGGCAGC GTTGACCATG ATTGCCAGCT CGACCAAACG GTTAAAGGAC ATTACATGA
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Protein sequence | MNKQELSKTD RIILDIGQQI VGGKYAPGTP LPAEAELCEE FQTSRNIIRE VFRALMAKRL VEVKRYRGAF VAARNQWNYL DTDVLQWVLA SDYDPRLISA MSEVRNLVEP TIARWAAERA TSSELAVIEA ALNDMISNHQ NRDAFNEADI RFHEAVLAAV HNPVLQQLSV AISSLQRAVF ERTYMPDEDN MPRTLREHQD LYDAIRHQDI EAAERAALTM IASSTKRLKD IT
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