Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_r2 |
Symbol | |
ID | 4794290 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 144166 |
End bp | 146983 |
Gene Length | 2818 bp |
Protein Length | |
Translation table | |
GC content | 55% |
IMG OID | 640721055 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00999234 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.528087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATAAGGGCGT TTGGTGGATG CCTTGGCAGC AAGAGGCGAT GAAGGACGTG ATACTCTGCG ATAAGCCATG GGGAGCTGAG AATAAGCTTT GATCCATGGA TCTCCGAATG GGGAAACCCA CCTGAAATCC AGTTGTTGTT ACCCTCGGGT ATCAACAACC GGGTTAACCA GGTACTTATC ACCTGAATAC ATAGGGTTTT AAGAGCGAAC CCGGGGAACT GAAACATCTA AGTACCCGGA GGAAAGGAAA TCAACAGATA CTCCCCCAGT AGCGGCGAGC GAACGGGGAC CAGCCGAGCC GTGAGAATGA CCAGAATGGC CTGGAAAGGC CAGCCATAGC GGGTGACAGC CCCGTATGGG AAGTTTGATC GGACGCATTA AGTAGGGCGG GACACGTGAA ATCCTGTCTG AAGATCGGGG GACCACCCTC GAAGGCTAAG TACTCCTTGC TGACCGATAG CGAACCAGTA CCGTGAGGGA AAGGTGAAAA GCACCCCGAC GAGGGGAGTG AAACAGTTTC TGAAACCGGA CGCCTACAAG CAGTCGGAGG GGCCTTGCGC CCTGACGGCG TACCTTTTGT ATAATGGGTC AACGACTTGG TCTGTCTGGC AAGCTTAAGC CGTTAGGTGT AGGCGCAGCG AAAGCGAGTC TTAAAAGGGC GCATGAGTCA GACGGATCAG ACCCGAAACC AGATGATCTA GGCATGAGCA GGCTGAAGGT TGGGTAACAC CAACTGGAGG GCCGAACCCA CACCTGTTGA AAAAGGTCGG GATGACTTGT GCCTAGGGGT GAAAGGCCAA TCAAATCTGG AGATAGCTGG TTCTCCGCGA AAGCTATTTA GGTAGCGCGT CAGACGAATT CTCCCGGGGG TAGAGCACTG CATGGATGAT GGGGGCCCAC AGCCTTACTG AGTCTAAGCA AACTCCGAAT ACCGGGAAGA ACTATCTGGC AGACACACGG CGGGTGCTAA CGTCCGTCGT GGAGAGGGAA ACAACCCTGA CCAACAGCTA AGGCCCCCAA TTCGTGGCTA AGTGGGAAAG CATGTGAGAC TTCCAAAACA ACCAGGAGGT TGGCTTAGAA GCAGCCATCC TTTAAAGATA GCGTAACAGC TCACTGGTCT AATCAAGAGG TCTTGCGGCG AAGATGTAAC GGGGCTCAAG CCACGAGCCG AAGCTTTGGG TGTGCATTTA TGCACGCGGT AGCGGAGCGT TCTGTGATAT AGAACGCTGC CTCCTTAGTA TCCTCGGGTA TATTGGAGGC AATGTTCTGA CTGTGAAGCC GGGCTGTAAG GCATCCGGTG GAGTGATCAG AAGCGAGAAT GTTGACATGA GTAGCGACAA ACAGGGTGAG AGACCCTGTC GCCGAAAGTC CAAGGGTTCC TGCTTAAAGC TAATCTGAGC AGGGTAAGCC GGCCCCTAAG GCGAGGCCGA AAGGCGTAGT CGATGGGAAC CAGGTTAATA TTCCTGGGCC AGGAGATGGT GACGGATCGC AGGTGTAGTT CCTCCTTATC GGATTGGAGG GGCTGCTGAG CGGTTCCTGG AAATAGCCCT CCACAAGACC GTACCCTAAA CCGACACAGG TGGACTGGTA GAGAATACCA AGGCGCTTGA GAGAACCACA TTTAAGGAAC TCGGCAAAAT ACCTCCGTAA GTTCGCGAGA AGGAGGCCCC GTTGGCAGGC AACTGTCGGC GGGGGGCACA AACCAGGGGG TGGCGACTGT TTACTAAAAA CACAGGGCTC TGCGAAGCCG TAAGGCGACG TATAGGGTCT GACGCCTGCC CGGTGCCGGA AGGTTAAAAG GAGAGGTGCA AGCCTTGAAT TGAAGCCCCG GTAAACGGCG GCCGTAACTA TAACGGTCCT AAGGTAGCGA AATTCCTTGT CGGGTAAGTT CCGACCTGCA CGAATGGCGT AACGACTTCC CCGCTGTCTC AAATGTGGAC TCAGCGAAAT TGAATTGTCT GTGAAGATGC AGACTTCCCG CGGTTAGACG GAAAGACCCC ATGCACCTTT ACTATAGCTT CGCACTGGCA TCAGGATTGC GATGTGCAGG ATAGGTGGTA GGCGCTGAAA CGGGGACGCC AGTTCCCGTG GAGCCATCCT TGAGATACCA CCCTTCGCAC TCTTGATGTC TAACCGCGGC CCGTTATCCG GGTCCGGGAC CCTGCGTGGT GGGTAGTTTG ACTGGGGCGG TCGCCTCCCA AAGAGTAACG GAGGCGCGCG AAGGTTGGCT CAGAGCGGTC GGAAATCGCT CGTCGAGTGC AATGGCAGAA GCCAGCCTGA CTGCAAGACT GACAAGTCGA GCAGAGACGA AAGTCGGCCA TAGTGATCCG GTGGTCCCGA GTGGAAGGGC CATCGCTCAA CGGATAAAAG GTACGCTGGG GATAACAGGC TGATGATGCC CAAGAGTCCA TATCGACGGC ATCGTTTGGC ACCTCGATGT CGGCTCATCT CATCCTGGGG CTGGAGCAGG TCCCAAGGGT ATGGCTGTTC GCCATTTAAA GAGGTACGTG AGCTGGGTTT AGAACGTCGT GAGACAGTTC GGTCCCTATC TGCCGTGGGT GTAGGATACT TGAGAGGAGT TGCCCCTAGT ACGAGAGGAC CGGGGTGAAC GTTCCACTGG TGGACCAGTT ATCGTGCCAA CGGTAGTGCT GGGTAGCTAT GAACGGACAG GATAAACGCT GAAGGCATCT AAGCGTGAAG CCCCCCTCAA AACAAGGTAT CCCTTGAGAG CCGTGGAAGA CCACCACGTC GATAGGCCGG AGATGTAAGC GCAGCAATGC GTTCAGTTGA CCGGTACTAA TCGCTCGATT GGCTTGAT
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Protein sequence | |
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