| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5114 |
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| Symbol | |
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| ID | 4583675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 629664 |
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| End bp | 631784 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639772417 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_918870 |
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| Protein GI | 119387836 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCCG GCCTGCGCCG CCTGTTGCCT GTCGCCGCAC CGGGGCTGGC GCTGATGCTC
TGGGCGCTTG GCGGTGCGGT GCTGTTCCAT GCCTCGCTGC CGGCGGGGCA GGGTGCCGGG
CTGGTCTCGG CGCTTGGTCC CGCGCTGCAG GCCAACGGCG CGATCCTGTT CGGCTGGTGG
CTGGCCGGGG CGGCGCTGGC GGGCTGGTGG GCGGCACGGC TTCATGCCCG CCATGTCGAG
GGTCCGGCGC GGCTGGCCGA TGCGGCGCGG CTGCTGACCG ACAATGCCGA TGCGCCGCGG
CTGGAGGCGG CTTCGCCTCC TGCGCTGGCC GCGCTGGCCG ATGCGGTGAA CCGGCTGGCC
GATCAGCGCC AGGCCCTGCG CACCGACATG GCCCGGCTGG TGGCCGAGGC GCAGCAGAAG
GTGGCGCAGG AACGCGACCA GCTTGGCGCG CTGATGGCCG AGTTGCGCCA AAGCGTCGTG
GTCTGCAATC TCGACGGCCG CATCCTGCTT TACAACGACC ATGCGCGCGG CCTGTTCCAT
CGCGTCTCGG GCGGGCAGCT TGCCGGCGGG GCCGAGGCGA TCGGGCTGGG CCGCTCGATC
CACGGCGTGA TCGACCGCGC CCTGATCGAA CATGCGCGCG AGACGGTGGA CCGCCATATC
GCGCGGGGCG ATACGGCGGT TTCGGCGCAA TTCGTCACCA CCACGGCCAC GGGCAGCCTG
CTTCATGTCG TGCTGGCGCC GGTGCGGTCG CAGGGCGGCG CGATCAGCGG CTATGTCCTG
CTTCTGGACG ACATCACCCA GGATTATGCC GCCCAATCCC GTCGCGACCG CCGCCTGACC
GAGCTGACCG AGGCCAGCCG CGCCTCGCTG GCCAATATGG GCGCGGCGCT GGACATGCTG
GACTATCCCG ACCTGGAGCC GGCCGAGCGC GACGGCTTCC ATGCCATCGT CCGCGACGAG
GTGGCGGCCA TGGGCCAGCG GCTGGCGGCG ATGACGGCGG ATGCCTCGCA AGAGATCCTG
ACCCGCTGGC CCCTGCAAGA GATGCTGGGC GACGACCTTC TGGCGGCCGC GGCGCAGCAT
GTGCTGGCGC AGACCGGGCG GGTGGCCAAG GTCGAAAGCG CCGAAGAGGG GCTGTGGCTG
CGGCTGGACA GCTTTTCGCT GATCCAGGCG CTGGGCGCGC TGGCGGGGCA GTTGAAGGGG
CCGCAGGGCA TGCCGTCGCT GACCCTGCGC CTGGCGCCGG CCGCGACGCC GGGCTGGGCG
CATCTGGATC TGGTCTGGCC GCTTGATCCG GCCGCCCCGG CCGCGGGTGG CGATACCGGC
GTGCAAAGCG CCGCCCGCGA CATCGCCGAG CGGCATGGCG GCGAATTGTG GCTGGAACAG
GACCGCCCGG CCGGCCTGTC CTTCTTTCGC TTCCTGTTGC CCACCGCGGC GGCCGGACCC
GAGGCCGAGG CGCTGGAGGC GCGGCCGGAA TTCTATGATT TCGACCTGTT CGCGGCCAGC
GATTCCAGTC GCTCGCTGGA CGACCAGCCG CTGGAGCGGC TGAGCTATAC CGTCTTCGAT
ACCGAGACGA CCGGCCTGAA CCCCGCGCAG GGCGACGAGA TCATCCAGAT CGGCGCACTG
CGCATCCTGA ACGGCAAGCT CTTGCGCGGC GAACGCTTCG ACCAGCTTGT CGATCCCGGC
CGCGAGATCC CGCCCGAATC CATCCCCTAT CACGGCATCC ATCCCGAGAT GGTGCAGGGC
CAGCCCCGCA TCGCCGAGGT GCTGCCGGCA TTCCACGCCT ATGCCTCGGA CACGGTTCTG
GTCGGCCACA ACGTCGCCTT CGACATGCGC TTCCTGCAAC TGAAAGAGGC GGCGACCGGG
CTGCGCTTCG ACCAGCCGGT GCTGGACACG CTGCTTCTGG CCAGCATCGC CCAGCCGCAC
GAGCCCTCGC ATTCGCTGGA GGCCATCGCT GCGCGGCTGG GGGTCGAGAT CACCCAGCGC
CACAACGCGC TGAGCGATGC GCTGGTGACG GCCGAGGTGT TCTTGCGCCT TCTGCCGCTG
CTCAAGGCCC GCGGCGTCGT CACGTTGGGC CAGGCACGCG AGGCAGCCGA GCATTCCTAT
TACGCCCGGC TGCGGTATTA G
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| Protein sequence | MRPGLRRLLP VAAPGLALML WALGGAVLFH ASLPAGQGAG LVSALGPALQ ANGAILFGWW
LAGAALAGWW AARLHARHVE GPARLADAAR LLTDNADAPR LEAASPPALA ALADAVNRLA
DQRQALRTDM ARLVAEAQQK VAQERDQLGA LMAELRQSVV VCNLDGRILL YNDHARGLFH
RVSGGQLAGG AEAIGLGRSI HGVIDRALIE HARETVDRHI ARGDTAVSAQ FVTTTATGSL
LHVVLAPVRS QGGAISGYVL LLDDITQDYA AQSRRDRRLT ELTEASRASL ANMGAALDML
DYPDLEPAER DGFHAIVRDE VAAMGQRLAA MTADASQEIL TRWPLQEMLG DDLLAAAAQH
VLAQTGRVAK VESAEEGLWL RLDSFSLIQA LGALAGQLKG PQGMPSLTLR LAPAATPGWA
HLDLVWPLDP AAPAAGGDTG VQSAARDIAE RHGGELWLEQ DRPAGLSFFR FLLPTAAAGP
EAEALEARPE FYDFDLFAAS DSSRSLDDQP LERLSYTVFD TETTGLNPAQ GDEIIQIGAL
RILNGKLLRG ERFDQLVDPG REIPPESIPY HGIHPEMVQG QPRIAEVLPA FHAYASDTVL
VGHNVAFDMR FLQLKEAATG LRFDQPVLDT LLLASIAQPH EPSHSLEAIA ARLGVEITQR
HNALSDALVT AEVFLRLLPL LKARGVVTLG QAREAAEHSY YARLRY
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