Gene Pden_5089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5089 
Symbol 
ID4583650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp602675 
End bp603112 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID639772392 
ProductMarR family transcriptional regulator 
Protein accessionYP_918845 
Protein GI119387811 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.104919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC CCCTGTCCAA GCGCCGGCTG AAGCTGTGGA TCCGCCTGCT GGGCGTCACC 
CGCGCGGCCG AGGGGCAGTT GCGCGAATTC CTGCGGGTCC GGCACGACAC CACGCTGCCG
CGCTTCGACG TGATGGCGGC GCTGTATCGC CGGCGCGAGG GCGTCACCAT GAGCGAGCTG
TCGCGGATGC TGCTGGTCTC GAACGGCAAT GCCACGGCGG TCGTGGACCG GCTGGAAAAG
GACGGGCTGG CGCGGCGCAC GCCCTCGGAA ACCGACCGGC GCACGGTCTT CGTCAGCCTG
ACGCCCGAGG GGCTGGCGGC CTTCGAGAGC TTTGCCGCCG ATCACGAGGC CGAGGTGAAC
CGCATTTTCG CCGGGCTGAC CGAGCAGGAC ATCGACCTGC TGACCGAAAT CCTGAAACGC
ATGGGGGGGC CGAAATGA
 
Protein sequence
MSDPLSKRRL KLWIRLLGVT RAAEGQLREF LRVRHDTTLP RFDVMAALYR RREGVTMSEL 
SRMLLVSNGN ATAVVDRLEK DGLARRTPSE TDRRTVFVSL TPEGLAAFES FAADHEAEVN
RIFAGLTEQD IDLLTEILKR MGGPK