Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5089 |
Symbol | |
ID | 4583650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 602675 |
End bp | 603112 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772392 |
Product | MarR family transcriptional regulator |
Protein accession | YP_918845 |
Protein GI | 119387811 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.104919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC CCCTGTCCAA GCGCCGGCTG AAGCTGTGGA TCCGCCTGCT GGGCGTCACC CGCGCGGCCG AGGGGCAGTT GCGCGAATTC CTGCGGGTCC GGCACGACAC CACGCTGCCG CGCTTCGACG TGATGGCGGC GCTGTATCGC CGGCGCGAGG GCGTCACCAT GAGCGAGCTG TCGCGGATGC TGCTGGTCTC GAACGGCAAT GCCACGGCGG TCGTGGACCG GCTGGAAAAG GACGGGCTGG CGCGGCGCAC GCCCTCGGAA ACCGACCGGC GCACGGTCTT CGTCAGCCTG ACGCCCGAGG GGCTGGCGGC CTTCGAGAGC TTTGCCGCCG ATCACGAGGC CGAGGTGAAC CGCATTTTCG CCGGGCTGAC CGAGCAGGAC ATCGACCTGC TGACCGAAAT CCTGAAACGC ATGGGGGGGC CGAAATGA
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Protein sequence | MSDPLSKRRL KLWIRLLGVT RAAEGQLREF LRVRHDTTLP RFDVMAALYR RREGVTMSEL SRMLLVSNGN ATAVVDRLEK DGLARRTPSE TDRRTVFVSL TPEGLAAFES FAADHEAEVN RIFAGLTEQD IDLLTEILKR MGGPK
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