Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5082 |
Symbol | |
ID | 4583643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 595077 |
End bp | 595811 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639772385 |
Product | ABC transporter related |
Protein accession | YP_918838 |
Protein GI | 119387804 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.27733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC ATGCCATCAT CATGCGTGCC GTGAACAAGT ATTACGGCGC CTATCATGCG CTGGTCGATA TCGACCTGAC CGTGACGCGG GGCGAGCGCA TCGTCATCTG CGGGCCCTCG GGCTCGGGCA AGTCGACGCT GATCCGCACC ATCAACCAGC TGGAGCCCAT CGAATCCGGC ACCATCATCG TCGATGGGGT GGAACTGACC GCCGGCGGCG ACAATGTCGC CAAGGTGCGG CAGGATGTCG GCATGGTCTT CCAGTCCTTC AACCTGTTCC CGCACATGAC CGTGCTGGAG AACTGCATCC TCGCGCCGAT GAAGACCCGC AAGACCCCGC GCGCCGAGGC CGAGGCGACG GCCCGCAAAT ACCTGGAGCG GGTGCGCATT CCCGAACAGG CCGACAAATA TCCGGCCCAG CTTTCCGGCG GCCAGCAGCA GCGCGTCGCC ATCGCCCGCG CGCTGTGCAT GAAGCCGCGC ATCATGCTGT TCGACGAGCC GACCTCGGCG CTGGACCCGG AAATGGTCAA GGAGGTGCTG GACACCATGA TCGACCTCGC GCGCGAGGGG ATGACCATGC TTTGCGTCAC GCATGAGATG GATTTCGCCC GTGCCGTCGC CGACCGGGTG ATCTTCATGG ACAAGGGCGT GATCGTCGAG GAGAACGCGC CGGACGAGTT CTTCGGCAAT CCCAGGAACG AGCGGCTGCA GAACTTCCTG GGCCAGATCG CATGA
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Protein sequence | MTEHAIIMRA VNKYYGAYHA LVDIDLTVTR GERIVICGPS GSGKSTLIRT INQLEPIESG TIIVDGVELT AGGDNVAKVR QDVGMVFQSF NLFPHMTVLE NCILAPMKTR KTPRAEAEAT ARKYLERVRI PEQADKYPAQ LSGGQQQRVA IARALCMKPR IMLFDEPTSA LDPEMVKEVL DTMIDLAREG MTMLCVTHEM DFARAVADRV IFMDKGVIVE ENAPDEFFGN PRNERLQNFL GQIA
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