Gene Pden_5082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5082 
Symbol 
ID4583643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp595077 
End bp595811 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID639772385 
ProductABC transporter related 
Protein accessionYP_918838 
Protein GI119387804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.27733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC ATGCCATCAT CATGCGTGCC GTGAACAAGT ATTACGGCGC CTATCATGCG 
CTGGTCGATA TCGACCTGAC CGTGACGCGG GGCGAGCGCA TCGTCATCTG CGGGCCCTCG
GGCTCGGGCA AGTCGACGCT GATCCGCACC ATCAACCAGC TGGAGCCCAT CGAATCCGGC
ACCATCATCG TCGATGGGGT GGAACTGACC GCCGGCGGCG ACAATGTCGC CAAGGTGCGG
CAGGATGTCG GCATGGTCTT CCAGTCCTTC AACCTGTTCC CGCACATGAC CGTGCTGGAG
AACTGCATCC TCGCGCCGAT GAAGACCCGC AAGACCCCGC GCGCCGAGGC CGAGGCGACG
GCCCGCAAAT ACCTGGAGCG GGTGCGCATT CCCGAACAGG CCGACAAATA TCCGGCCCAG
CTTTCCGGCG GCCAGCAGCA GCGCGTCGCC ATCGCCCGCG CGCTGTGCAT GAAGCCGCGC
ATCATGCTGT TCGACGAGCC GACCTCGGCG CTGGACCCGG AAATGGTCAA GGAGGTGCTG
GACACCATGA TCGACCTCGC GCGCGAGGGG ATGACCATGC TTTGCGTCAC GCATGAGATG
GATTTCGCCC GTGCCGTCGC CGACCGGGTG ATCTTCATGG ACAAGGGCGT GATCGTCGAG
GAGAACGCGC CGGACGAGTT CTTCGGCAAT CCCAGGAACG AGCGGCTGCA GAACTTCCTG
GGCCAGATCG CATGA
 
Protein sequence
MTEHAIIMRA VNKYYGAYHA LVDIDLTVTR GERIVICGPS GSGKSTLIRT INQLEPIESG 
TIIVDGVELT AGGDNVAKVR QDVGMVFQSF NLFPHMTVLE NCILAPMKTR KTPRAEAEAT
ARKYLERVRI PEQADKYPAQ LSGGQQQRVA IARALCMKPR IMLFDEPTSA LDPEMVKEVL
DTMIDLAREG MTMLCVTHEM DFARAVADRV IFMDKGVIVE ENAPDEFFGN PRNERLQNFL
GQIA