| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5066 |
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| Symbol | |
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| ID | 4583627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 578272 |
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| End bp | 579252 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639772369 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_918822 |
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| Protein GI | 119387788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC TGAACCGTCG CCGCTTTGCG GCGCTGGCCG TGGCATGCCT GACCGCCGCT
TCCGCCATGG GCGCCTCGGC CGCCGAACTG ACGCTGAAGC TGGGCCATCT CGCGAACGAG
CAGAACTCCT GGCACAAGGC GTCGCTGAAA TTCGCCGAAG AGCTTGACCG CCTGACCGAA
GGCCGCATCG CCGTCGAGGT CTTTCCCAAC GACTCGCTGG GCCGCGAGAT GGACCTGATC
AACGGCATGC AGCTGGGCAC GGTCGAAATG ACCATCACCG GCGAAAGCCT GCAGAACTGG
GCGCCGATGG CGGCTTTGCT GGCCATTCCC TATGCCTATC AGTCGCTTGA GCACATGGAC
GAGGTTGCCG GCGGCGAGAT CGGCAAGGAA ATCGAAGCGC AGATCGTCGA ACGCGCGCAG
GTTCGCCCCA TCGCCTATTT CGCCCGCGGC CCGCGCAACC TGACCGCGAA CCACCCCATC
ACCACGCCGG CGGAACTGAA CCGGATGCGG CTGCGGGTGC CGAACGTGCC GCTGTTCGTC
GACACCTGGA CCGCGCTTGG CGCCCAGCCG ACGCCGATGG CTTTCTCGGA AGTCTTCACC
TCGCTGCAGA ACGGCACCAT CGGCGGGCAG GAAAACCCGC TGGCGCTGAT CCAGGCCGCC
TCGCTGAACG AGGTGCAAAG CCATGTGAAC CAGACCGAGC ATGTGCGCTC CTGGATCTAC
CTGACCATCG CCGAGCAGGT CTGGCAGCGT CTGCCCCCGG AGGATCAGGC CCATGTGCTG
GAAGCCGCCC GCATCGCGCA GGAGTTCGAG CGCGAGCAGT TCCTGCAAGA CGAGGACGCC
ATCCGCGCCG ATCTGGAGGC CAAGGGCATG ACATTCGTCG AGGTCGACCA GAAAGCCTTT
GCCGACGGCT CGCGCGATGC GGTGATCAAA AGCGTCGATG ACAGCATCCG GCCCGTCGTC
GAGGAATTGT TCAACCATTG A
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| Protein sequence | MITLNRRRFA ALAVACLTAA SAMGASAAEL TLKLGHLANE QNSWHKASLK FAEELDRLTE
GRIAVEVFPN DSLGREMDLI NGMQLGTVEM TITGESLQNW APMAALLAIP YAYQSLEHMD
EVAGGEIGKE IEAQIVERAQ VRPIAYFARG PRNLTANHPI TTPAELNRMR LRVPNVPLFV
DTWTALGAQP TPMAFSEVFT SLQNGTIGGQ ENPLALIQAA SLNEVQSHVN QTEHVRSWIY
LTIAEQVWQR LPPEDQAHVL EAARIAQEFE REQFLQDEDA IRADLEAKGM TFVEVDQKAF
ADGSRDAVIK SVDDSIRPVV EELFNH
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