Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5064 |
Symbol | |
ID | 4583625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 576413 |
End bp | 577693 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639772367 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_918820 |
Protein GI | 119387786 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.556964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATCTTT TCCTGCTTCT GACCACCTTT TTCGTGACCC TGGCGCTTGG CGTGCCGGTC GCGGTCTGCC TTGGGCTTTC GTCGCTGGCC TATATCCTGT CGGCGGGGCT GCCGGTCGTC ATCATCCCGC AGCGCATGTA TGCGGGCATG GACGTCTTTG TCCTGCTGTG CATCCCCGGC TTCATCCTGG CCGGCAACCT GATGAATTTC GGCGGCATCA CCGAGCGTAT CATCCGCCTG GCCAACGCCA TGGTGGGCTG GATGCGCGGC GGGCTGGCCA TGGCGAACGT CGCGGATTCG ATGATGTTCG GCGGCGTCTC GGGCACGGCG GTCGCCGATG TCGCGGCGAC CGGCGGCGTG ATGATCCCCG GCATGAAGAA ATCCGGCTAT CCCGGCGATT TCGCCGCCGC GATCACCGCC GCCTCGGCCA CCGTGGGGCC GATGCTGCCG CCCAGCGTGC CGATGATCAT CGTGGGCGCG CTGTCGGGGA TCTCGGTCGG CCAGCTGTTC CTGGCCGGTG CGGTGCCGGG CGTGCTGATG GGCATCGGCA TGGCGATCAC CTGCTATATC CTGGCCGTGC GCCGCAACTA TCCGCGCCAG CAATGGCAGG GCTTCGGCGA GCTGATCGCG GCCTTCCTCG CCGCCTTCTG GGCGCTGGCC ATGACCGGGC TGATCATCGG CGGCCTGCTG ACCGGCATCG CCACCCCGAC CGAGACCGCC ATCGTCGCCT GCCTTTACGC CTTTGTCGTC GGCGCCTTCG TCTATCGCGA GCTGCCGATC CGCGCGGTGC CGCGCATCGT CGTCAACAGC GCGATCTCCT CGGCCGGCAT CCTGGCGCTG GTCGGTTTCG CCAACGTCTT CGGCTCGATC CTGGCATCCG AGCGCATCCC GCAGATGCTG GTCAGCACCG TGCTGGCGAT CACCGACAAC CCGATCCTGG TGATCCTGCT GATCAACGTG CTGCTGTTGT GCGTCGGCAT GTTCATGGAA ACCATCGCCG CGCTGATCAT CCTGTTCGTG CCGCTGCTGG GGCTGGCGAC CAGCGTCGGC ATCGAGCCGC TGCATTTCGC CACCTTCGCG GTCCTGAACC TGATGATCGG CCTGACCACG CCGCCGGTCG GGGTCTGCCT GTTCGTCGCC TGCAACATCG CACGCGAACC GCTGGCCAAG GTGATCAGCG CGGTCATCCC CTTCCTGATC TCGAACATCG TCGTGCTGCT GCTGGTATCC TACTACCCGC CCTTTGCCAC CTGGCTGCCG ACGACGCTGA TGGGGAACTG A
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Protein sequence | MDLFLLLTTF FVTLALGVPV AVCLGLSSLA YILSAGLPVV IIPQRMYAGM DVFVLLCIPG FILAGNLMNF GGITERIIRL ANAMVGWMRG GLAMANVADS MMFGGVSGTA VADVAATGGV MIPGMKKSGY PGDFAAAITA ASATVGPMLP PSVPMIIVGA LSGISVGQLF LAGAVPGVLM GIGMAITCYI LAVRRNYPRQ QWQGFGELIA AFLAAFWALA MTGLIIGGLL TGIATPTETA IVACLYAFVV GAFVYRELPI RAVPRIVVNS AISSAGILAL VGFANVFGSI LASERIPQML VSTVLAITDN PILVILLINV LLLCVGMFME TIAALIILFV PLLGLATSVG IEPLHFATFA VLNLMIGLTT PPVGVCLFVA CNIAREPLAK VISAVIPFLI SNIVVLLLVS YYPPFATWLP TTLMGN
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