Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5037 |
Symbol | |
ID | 4583598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 549321 |
End bp | 549998 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772340 |
Product | ABC transporter related |
Protein accession | YP_918793 |
Protein GI | 119387759 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC TCGAGAACCT GACCAAGCGC TATCGGCTCA AGGGCCGCGA GACGCTGGTG GCGGACCGGC TGAACGCCGA GTTCCCCACC GGGGCCTCGG TGGCGCTGCT GGGCCGCAAC GGCGCGGGCA AGTCGACGCT GCTCAGGATG ATCGCCGGCA CGGTCTCGCC CACGGCCGGG CGGGTGCTGT CGGACGGCAC CATCTCCTGG CCGGTGGGCT TTGCCGGCAG CTTCCACCCC GAGCTGACCG GGGCGCAGAA CGTGCGCTTC GTGGCGCGCA TCTACGGCGT GGATACCGAC GAGCTGATCG ATTACGTCGA GGATTTCGCC GAGCTGGGCC AGCATTACCA CCAGCCCTTC GGCAGCTATT CCTCGGGCAT GCGCTCGCGG CTGGCGATGG GCGCCAGCAT GGGCATCCAT TTCGACACCT ACCTGGTCGA CGAGGTGACC AGCGTCGGCG ACGCCAATTT CCGCACCAAG TCGCAGCGCG TCTTTGCCGA GCGCATGGCC CGCTCCTCCG CCATCGTGGT CAGCCATTCC ATGCCGATGA TCCGCAGGAT GTGCACCATG GGCGCCGTCC TGCACCACGG CCGCCTCACC CTGTGCACCG ACCTCGAGGA GGCCATCAGA ATGCACGAGG AAATCCTCAG GGTCCCACCG GACACGCAGG ACGAGTGA
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Protein sequence | MIRLENLTKR YRLKGRETLV ADRLNAEFPT GASVALLGRN GAGKSTLLRM IAGTVSPTAG RVLSDGTISW PVGFAGSFHP ELTGAQNVRF VARIYGVDTD ELIDYVEDFA ELGQHYHQPF GSYSSGMRSR LAMGASMGIH FDTYLVDEVT SVGDANFRTK SQRVFAERMA RSSAIVVSHS MPMIRRMCTM GAVLHHGRLT LCTDLEEAIR MHEEILRVPP DTQDE
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