| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5012 |
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| Symbol | |
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| ID | 4583573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 522811 |
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| End bp | 523842 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772315 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_918768 |
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| Protein GI | 119387734 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA ACATCGTCAC CACATCGCGC CGCAACCTTC TGCGCTCGGG TATCGGCGCC
GCGCTGGCCG CGCCCTTCCT GGGCCTTGGC GTGGGCTCGC TGGCCCGCGC GCAGGGCGCA
GGGGGGCTGA AGCCGCTCCG CTTCGCCTCG AACGCCTCGG CGATCTGCCT TGCCCCGGTC
TTCGTCGCGC AGGACCACGG GATCTTCGAG AAGCATGGGC TGGACGTCGA GATCGTGAAC
TTCGGCGCCT CGACCGAGGC GCTGCTGGAG GCCATCGCCA CCGGCAAGGC GGATGGCGGC
GTCGGCATGG CGCTGCGCTG GCTCAAGGCG CTGGAGCAGG GCTTCGACGT CAAGATAACC
GCCGGCACCC ATGGCGGCTG CTCGCGCCTG GTCGCGCTGC AATCTGCCGG AATCCGGGAA
CTGGCCGATC TGAAGGGCAA GACCATCGGC GTCACCGACC TTGCCGCGCC GGGCAAGAAC
TTCTTCTCGA TCCTGCTGCA CCAGGCCGGA ATCGACCCCG AGACGGATGT GAAATGGCGG
GCCTTCTCGA CCGACGTGCT TGAGATCGCG GCCGAGCGGG GCGAGATCGA CGCCATCGCC
GACGGTGATC CGCGTGCCTA TTTCTGGCTG CACGACACGC CCGACAAATA TGTGCAGATC
GCCACGAACC TGGACCATGG CTTCGAGAAC CGCGTCTGCT GCATCGCCGG CCTCAGCGGC
AGCCTGGTGC GCGACGACCC CGATACGGCC CGGGCGCTGA CCCGCGCGCT GCTCGAGGCG
CAGGACTGGA CCGTGGCCCG TCCCGAGGAC GCGGCCAAGG CGTTCCTGCC GCAGGCGCCC
AAGAACCGCA GCGTCGAGGA CCTGATCGCG GTGCTCAAGG ACCAGACCCA CGATCACACG
CCCACCGGCG CCGACCTCAA GACCGAGATT GCGCAATATG CCGAGGAGTT GCGCGCGATC
AACGTCTTCC GCCGCTCGAC CGATCCGCAG CAATTCGCCG AGCGGGTCTA TGCCGACGTT
CTGACGGCCT AG
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| Protein sequence | MTRNIVTTSR RNLLRSGIGA ALAAPFLGLG VGSLARAQGA GGLKPLRFAS NASAICLAPV
FVAQDHGIFE KHGLDVEIVN FGASTEALLE AIATGKADGG VGMALRWLKA LEQGFDVKIT
AGTHGGCSRL VALQSAGIRE LADLKGKTIG VTDLAAPGKN FFSILLHQAG IDPETDVKWR
AFSTDVLEIA AERGEIDAIA DGDPRAYFWL HDTPDKYVQI ATNLDHGFEN RVCCIAGLSG
SLVRDDPDTA RALTRALLEA QDWTVARPED AAKAFLPQAP KNRSVEDLIA VLKDQTHDHT
PTGADLKTEI AQYAEELRAI NVFRRSTDPQ QFAERVYADV LTA
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