Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5005 |
Symbol | |
ID | 4583566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 515671 |
End bp | 516540 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772308 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_918761 |
Protein GI | 119387727 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA CCGAGATCGA CCGCAGCTAT GCCGCACTGC GCAAGGATCG CCCGGCCGAG CCGGCGGATG CGCTGGTGCG GCTGACCCCG GCCACGGCCC GCGGGCGGCA GGTGCCGCGC TGGCTGCGCC GGGGCATCGG CCCGGTGGCG CTGGTGCTGG TCTGGCATCT CGCCTCGATC ACCGGCGTCC TGCCCGCCGA GGTGCTGGCG GGGCCTGCCA CCGTGCTTTC CAGCGCCGCG AAGCTGATCC AGACCGGCGA GTTGCAAGAG GCGGTCGTCG TATCGATGCA GCGCGCGATG AGCGGGCTGC TGATCGGCGG CACCATCGGC GTCGCGCTTG CCATCCTGTC CGGCCTGACC CGGCTGGGCG AGGATCTGGT CGACGCGCCC ATGCAGATGC TGCGCACCGT GCCGAACGTG GCGCTGATCC CGCTGCTGAT CATCTGGTTC GGCATCGGCG AGGCGCCGAA AATCGCGCTG ATCGCGCTTG CGACGGCCTT TCCGTTGTAT CTCAACGTCT ATGCCGGCAT CCGGGGCGTG GACCAGTCCC TGATCGAGGC CGGGCGGACG CTGGGCCTTG GCCGTGCCGG GCTGGTGCGC CATGTCATCC TGCCCGGTGC GCTGCCCAAT GCCCTGGTCG GCCTGCGCTA TTCGCTGGGC ATCGCCTGGC TGGCGCTTGT CTTTGGCGAG CAGATCAACG CCACCGCCGG CGTGGGCTAT CTGATGGCCA ATGCGCGCGA ATTCTTCCAG ACCGACGTGA TCGTCGTCTG CCTTGTCGTC TATGCCCTGC TCGGCCTTGC CGTCGATCTG GTGGTGCGCA GCTTGGAAAG GATCTTCCTG TCATGGCGAC CCAACTTCAC CGGAGCCTGA
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Protein sequence | MSITEIDRSY AALRKDRPAE PADALVRLTP ATARGRQVPR WLRRGIGPVA LVLVWHLASI TGVLPAEVLA GPATVLSSAA KLIQTGELQE AVVVSMQRAM SGLLIGGTIG VALAILSGLT RLGEDLVDAP MQMLRTVPNV ALIPLLIIWF GIGEAPKIAL IALATAFPLY LNVYAGIRGV DQSLIEAGRT LGLGRAGLVR HVILPGALPN ALVGLRYSLG IAWLALVFGE QINATAGVGY LMANAREFFQ TDVIVVCLVV YALLGLAVDL VVRSLERIFL SWRPNFTGA
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