Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4998 |
Symbol | |
ID | 4583559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 510282 |
End bp | 511034 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772301 |
Product | ABC transporter related |
Protein accession | YP_918754 |
Protein GI | 119387720 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.101708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTGG AAGTCAACGA ACTGACCAAG CATTTCGGCG GGCTGAAGGC GGTGAACGGG GTCGACCTGC GGGTGGAGCA GGGTTCGATC CACTCGATCA TCGGTCCCAA CGGCGCCGGC AAGACCACGC TGTTCAACCT CATCACCGGG TCGATTCCGC CGATGTCCGG CACCGTCCTG TTCGACGGTC GCGACATCAC CGGCTGGCCG CCCGAGCGGC TGGCGCGGGG CGGCGTCGCG CGCACCTTCC AGCGCACCAG CATCTTCATG GACCTGCCGG TGCTGGAAAA CGTCGCGCTG GCGATCCGTT CGCGCGAAGG GTGCTCGGCC TCGCTGTGGC AGTCCCATCA GCACGAGGAC GAGGCCGCCG ACGAGGCGCG GGGTATCCTT GCCAGCGTCG GGCTGCGCGG GCGCGAGGAT GCGAAGGCCG GAATGCTGGC GCATGGTTAT CAGCGCGCGC TGGACATCGC CATCGGCCTT GCGCTGAAGC CCCGGCTGAT CCTGATGGAC GAGCCGCTGG CCGGCATGTC GCGCGGCGAC CGCGAGACCA TCGCCGCGCT GATCACCATG CTGCGCGAGA CCATGGGCCT GACCATCATC GTGGTCGAGC ATGACGTGGG CATGGTCATG CGCCTGTCCG ACCGCATCAC CGTCATGCAG CACGGCACTG TCATCGCCGA TGCCCCGCCC GACGAGATCC GCGGCAACGA GGCCGTCCGC CAAGCCTATC TGCACGGGAG TTTCGCACAA TGA
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Protein sequence | MILEVNELTK HFGGLKAVNG VDLRVEQGSI HSIIGPNGAG KTTLFNLITG SIPPMSGTVL FDGRDITGWP PERLARGGVA RTFQRTSIFM DLPVLENVAL AIRSREGCSA SLWQSHQHED EAADEARGIL ASVGLRGRED AKAGMLAHGY QRALDIAIGL ALKPRLILMD EPLAGMSRGD RETIAALITM LRETMGLTII VVEHDVGMVM RLSDRITVMQ HGTVIADAPP DEIRGNEAVR QAYLHGSFAQ
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