Gene Pden_4998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4998 
Symbol 
ID4583559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp510282 
End bp511034 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID639772301 
ProductABC transporter related 
Protein accessionYP_918754 
Protein GI119387720 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.101708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGG AAGTCAACGA ACTGACCAAG CATTTCGGCG GGCTGAAGGC GGTGAACGGG 
GTCGACCTGC GGGTGGAGCA GGGTTCGATC CACTCGATCA TCGGTCCCAA CGGCGCCGGC
AAGACCACGC TGTTCAACCT CATCACCGGG TCGATTCCGC CGATGTCCGG CACCGTCCTG
TTCGACGGTC GCGACATCAC CGGCTGGCCG CCCGAGCGGC TGGCGCGGGG CGGCGTCGCG
CGCACCTTCC AGCGCACCAG CATCTTCATG GACCTGCCGG TGCTGGAAAA CGTCGCGCTG
GCGATCCGTT CGCGCGAAGG GTGCTCGGCC TCGCTGTGGC AGTCCCATCA GCACGAGGAC
GAGGCCGCCG ACGAGGCGCG GGGTATCCTT GCCAGCGTCG GGCTGCGCGG GCGCGAGGAT
GCGAAGGCCG GAATGCTGGC GCATGGTTAT CAGCGCGCGC TGGACATCGC CATCGGCCTT
GCGCTGAAGC CCCGGCTGAT CCTGATGGAC GAGCCGCTGG CCGGCATGTC GCGCGGCGAC
CGCGAGACCA TCGCCGCGCT GATCACCATG CTGCGCGAGA CCATGGGCCT GACCATCATC
GTGGTCGAGC ATGACGTGGG CATGGTCATG CGCCTGTCCG ACCGCATCAC CGTCATGCAG
CACGGCACTG TCATCGCCGA TGCCCCGCCC GACGAGATCC GCGGCAACGA GGCCGTCCGC
CAAGCCTATC TGCACGGGAG TTTCGCACAA TGA
 
Protein sequence
MILEVNELTK HFGGLKAVNG VDLRVEQGSI HSIIGPNGAG KTTLFNLITG SIPPMSGTVL 
FDGRDITGWP PERLARGGVA RTFQRTSIFM DLPVLENVAL AIRSREGCSA SLWQSHQHED
EAADEARGIL ASVGLRGRED AKAGMLAHGY QRALDIAIGL ALKPRLILMD EPLAGMSRGD
RETIAALITM LRETMGLTII VVEHDVGMVM RLSDRITVMQ HGTVIADAPP DEIRGNEAVR
QAYLHGSFAQ