| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4982 |
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| Symbol | |
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| ID | 4583543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 492584 |
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| End bp | 493372 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772285 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_918738 |
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| Protein GI | 119387704 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR02415] acetoin reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.138148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT CCGTCGAAGG CCGCAGCATC ATCGTCACCG GCTCGGGCCG GGGCATCGGG
CGCTCCATCG CCGAGGGGCT GGCCAGGGCC GGTGCGCGGG TGGTGATCGC CGACATTGCC
GCCGCTACCG CAGAGGCCAC CGCCGCCGAG ATCCGCGAGG CGGGCGCGCA GGCCATCGGC
CTTGCCGTCG ACGTGACCGA CCGGGCCAGC GCGCGCGACC TGATCGCCCG CACCGTCGCC
GAATACGGCC GGCTCGACGC CATGTTCAAC AATGCCGGCA TCGCGCAGGT CAAGCAGTTC
AACGACATCA CCGAAGAGGA CTGGCACCGC GTCATGGACG TGAATGCCAT GGGCGTGCTG
ATCGGCATCC AGGAGGCGGC GAAGCAGTTC ATCGCCCAGG GCGGCGGCGG CAAGATCGTC
AACACCGCCT CGATCGCCGG CAAGCAGGGC TATGAGCCCC TGGCGCATTA CTCGGCCAGC
AAGTTCGCCG TGGTGGCGCT GACCCAGGCC GCCGCCCGCG CCTTCGGCAA GCACGGCATC
TGCGTCAACG CCATCTGCCC CGGCGTGGTC GCGACCGACA TGTGGAAGCT GATCGACAAG
GGCTTCAAGG ACGAGGGGCT GACCCAACGC GACAACGAGG CATTCGAGGG CTTTTCCGCC
GACATCCTGC TGGGCAGGCC TTCGCGCCCA GACGATCTGG CGGGGGTTTC GATCTTTCTC
GCCTCGGCCG GGTCCGATTA CATGACCGGG CAAAGCCTGG TCGTCGATGG AGGGATGGTG
CTGGTATGA
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| Protein sequence | MSNSVEGRSI IVTGSGRGIG RSIAEGLARA GARVVIADIA AATAEATAAE IREAGAQAIG
LAVDVTDRAS ARDLIARTVA EYGRLDAMFN NAGIAQVKQF NDITEEDWHR VMDVNAMGVL
IGIQEAAKQF IAQGGGGKIV NTASIAGKQG YEPLAHYSAS KFAVVALTQA AARAFGKHGI
CVNAICPGVV ATDMWKLIDK GFKDEGLTQR DNEAFEGFSA DILLGRPSRP DDLAGVSIFL
ASAGSDYMTG QSLVVDGGMV LV
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