| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4980 |
|---|
| Symbol | |
|---|
| ID | 4583541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 491175 |
|---|
| End bp | 492248 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772283 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_918736 |
|---|
| Protein GI | 119387702 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.155342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TGCGTTTCCA TGCCGCCAGG GATCTGCGGA TCGAGGACAT TCCCGAGCCG
CCCCGCCCCG GACCCGGCCA GGTGCTGATC CGAAACAGCC ATGTCGGCAT CTGCGGCACC
GACCTGCATG AATATGCCTC GGGTCCGATC TTCATCCCGA CCCAGCCGCA TCCCTATTCC
GGCGCCCATG GCCCGCAGGT GCTGGGCCAC GAGTTCGGCG GCGAGGTCGT GGCGGTGGGC
GAGGGCGTGA CCAAGGTGGC GCCCGGCGAC CGGGTGGCGG TGCAGCCGCT GATCATGCCG
CGCGGCGGCG AATATTTTGC CGACCGCGGC TGGCACAACC TCTCGGGCAG CCTGGCGCTG
GTCGGGCTTT CCTGGGCCTC GGGCGGCATG GCCGAGATGG CGCTGCTGAA CGACTACAAT
GTCGAGAAGA TCCCTGACGG CATGAGCGAC GAAGAGGCCG CGCTGGTCGA GCCGACCGCC
GTCTGCGTCT ATGCCTGCGA CCGGGGCCGG ATCACCGCCG GGGATTCGGT GCTGGTGACG
GGCGCCGGTC CCATCGGCAT CCTTGCGCTT CTGACCGCGC GGGCCTTCGG CGCGACGCGG
TTGTTCGTGT CGGACGTGAA CGACACGCGG CTGGCGCTTG CGGCCGAGGT CGTGCCGGGC
GTCGTCACCG TCAATCCTGC GCGCGAGGAT GTGGGCGAGA GGGTGCGCGC CGGCACGCAG
GACGGCATCG GCTGCGACGT GGCGCTGGAA TGCGTCGGCA ACGAACGTGC GCTGCAATCC
TGCCTCGACG CGGTGCGCAA GCAGGGGGTG ATCGTGCAGA CCGGGCTGCA TCCCGGCAAG
GGCAGCGTGG ATTTCTTCCA GCTGACGTTC AAGGATGCCG AGATCCGCGG CTCGTGGTGC
TATCCGACCC ATAGCTGGCC GCGCACCATC GAGCTGATCG CCTCGGGCGC CATCCCGGCC
AAGCGGGTGG TGACCAGGCG CATCGCGCTG GCCGACGCCG TGGCCGAGGG GTTCGAGGCA
CTCCTGGACC CTGCCGGCAG CCAGCTGAAG ATCCTGATCG ACCTCTCGCG CTGA
|
|---|
| Protein sequence | MKALRFHAAR DLRIEDIPEP PRPGPGQVLI RNSHVGICGT DLHEYASGPI FIPTQPHPYS
GAHGPQVLGH EFGGEVVAVG EGVTKVAPGD RVAVQPLIMP RGGEYFADRG WHNLSGSLAL
VGLSWASGGM AEMALLNDYN VEKIPDGMSD EEAALVEPTA VCVYACDRGR ITAGDSVLVT
GAGPIGILAL LTARAFGATR LFVSDVNDTR LALAAEVVPG VVTVNPARED VGERVRAGTQ
DGIGCDVALE CVGNERALQS CLDAVRKQGV IVQTGLHPGK GSVDFFQLTF KDAEIRGSWC
YPTHSWPRTI ELIASGAIPA KRVVTRRIAL ADAVAEGFEA LLDPAGSQLK ILIDLSR
|
|---|
| |