Gene Pden_4917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4917 
Symbol 
ID4583478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp424551 
End bp425105 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID639772220 
ProductXRE family transcriptional regulator 
Protein accessionYP_918673 
Protein GI119387639 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCATC ACGTTGGTGA AGACATCCGG TCGCTGCGCA AGTCGCGGGG CATGACCCTG 
CTTGAGCTTG CGGGCGATGT CGGGCGTTCG GTCGGCTGGC TGAGCCAGGT CGAGCGAGGG
CAGACGACGC CATCGGTCCA CGACCTGGGG CAGATCTCGG ATCGGCTGGG GGTGAACATC
AGCTTCTTCT TCCGCTCCTC CAGCCGGGCG CCCGAGGAAC GGGGGCTGGT CCTGCGCGCC
GCGGACCGGA CGCCCATCGG CTCGCAGGAA AGCGGTCTCG TCGAGGAGCT GCTGTCCCCG
ACGCTCAGCG GCTCGTTCGA GATGATCAAG TCGACCTTCG CGCCCGGCGC GTCCAGCGGC
GGACGGCGAA AGGCGCGGCC CAAGGAGGAT GGCGGCGTCC TGATCTCGGG CCGCCTGACC
CTGATCATAG GCGACCGCGA GATCCAGCTG GAGCCCGGCG ACAGCTTCCA GTTCCGCGAG
ACCGACTATG CCTGGCGCAA CGATGGCAAG GAACCTGCCG TCGCCATCTG GATCGTCTCG
CCGCCGATTT ACTAG
 
Protein sequence
MGHHVGEDIR SLRKSRGMTL LELAGDVGRS VGWLSQVERG QTTPSVHDLG QISDRLGVNI 
SFFFRSSSRA PEERGLVLRA ADRTPIGSQE SGLVEELLSP TLSGSFEMIK STFAPGASSG
GRRKARPKED GGVLISGRLT LIIGDREIQL EPGDSFQFRE TDYAWRNDGK EPAVAIWIVS
PPIY