Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4891 |
Symbol | |
ID | 4583452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 394418 |
End bp | 395980 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639772194 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_918647 |
Protein GI | 119387613 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.862065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.74496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCG CCCGCATTCT CGAGGCTTCC GCCGACCGCT ACCCGGATCA TCTTGCGCTG GTCTTCGAGG ACAGGCGCTG GACCTATGCC GAATGGCTGG CCCGCGTCCG CCGCTTTGCG CAGGCGCTGT CGGATCTGGG GGTGCGGCCG GGGGACCGCG TGGCCTTCTA TGTCTCGACC TCGGAAAACT CGGTGACGAC CTATTTCGCC TGCCAGATGC TGGGCGCGGT GGCGGTGCCG ATGAACTTTC GCCTTTCGGC GGGCGAGGCC GCCCACATCC TGCAGGATTC CGGCGCCCGC GTGCTGATCT ATGGCCGCAG CCTGACCGGG AACGTCGAAC GGATCGCGGC GCAGATGCAT TCGATCCACG ATTTCATCGG CTGCGCCTAC GACCGGGCAC ATATCCCCGC CGGCCACCTG CATTTCGAAA CCCTGGCCGA GCAGACCGCG GATCGCGACG AGCCGCGCAT CATTCCCTCG GGGGATGCGA TTTCCTCGCT GGTCTATACC TCGGGGACGA CCGGGCGGCC CAAGGGGGTG ATCCACACCC ATGCCAACGA CATCGCCATC GCGATGAACT GCGTCATGGA ATATTCGCTG AACCATACCG ACAATGCGCT GCATATCGCG CCGCTTTACC ATGTGGGCGG CATGCAAGCC TATTTCATTC CGCATCTGCT GGTCGGCGGC ACCAATGTCG TGATCGGCCG CTACGAGGCA GAAAAGACGC TGGACACCAT CGCGGCCGAG CGCATCACCA CGCTGTTCGC CGTGCCCACC CAAATCCAGG AGATGCTGTT TCACCCGCGC TTCCGCGATC AGGACCTCAC TTCGCTGCGG CTGATCACCA CCGGCGGCGC GGCCATTTCC GCCGCGACGA TGGAACGGGT GATGGCCGAG TTCTGCCCGG CGATCTTCAA CGGCTACGGC ATGACCGAAG CGTCGCTGAC GCTGGTGCTG CATCCGCAGG ACGCGCTGCG CAAGCTGGGA TCCTGCGGCA AGCCGACGCT GATTTCGGAA TGCCGGATCG TGACCGACGA TCCCATGCGC GAGGTGCCGC CCTCGGAAAC CGTGCCGCGC GGACAGGTGG GCCAGCTGAT CGTGCGCGGC CCGCAGGCGA TGCAGGGCTA TTGGAACAAC CCGTTCGAGA CGCAGAAGAA GCTGAAGGCA GGCTGGATCT ATACGGGCGA CCTGTTCAGC CAGGACCGGG ACGGGTTCTA TTATTTCCAC GGCCGGGCCG ACGACATGAT CGTCTCGGGC GGCGAGAACA TCCATCCGCG CGAGGTCGAG GAGATCCTCT ATCGCTGCCC CGGCGTGCAG GAGGTGGCAG TCGTCGGGCT GGCGGACGAG AAATGGGGCC AGGCGGTGAC GGCCTTCGTC GTCCGCTCGG ACCCGGCGCT GAGCGCGCAG GACCTGGATG CGTTCTGCAA GGCCAGCGAC GCTCTGGCGC CCTACAAGCG GCCCCGCCGA TACGAGTTTC TGGAAAGCCT GCCGCTGAAC CCCAGCGGCA AGGTGCTCCG GCGCGAACTG GTCGCGCGCC ATGCCCCGCA GCCGGCCTGC TGA
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Protein sequence | MHIARILEAS ADRYPDHLAL VFEDRRWTYA EWLARVRRFA QALSDLGVRP GDRVAFYVST SENSVTTYFA CQMLGAVAVP MNFRLSAGEA AHILQDSGAR VLIYGRSLTG NVERIAAQMH SIHDFIGCAY DRAHIPAGHL HFETLAEQTA DRDEPRIIPS GDAISSLVYT SGTTGRPKGV IHTHANDIAI AMNCVMEYSL NHTDNALHIA PLYHVGGMQA YFIPHLLVGG TNVVIGRYEA EKTLDTIAAE RITTLFAVPT QIQEMLFHPR FRDQDLTSLR LITTGGAAIS AATMERVMAE FCPAIFNGYG MTEASLTLVL HPQDALRKLG SCGKPTLISE CRIVTDDPMR EVPPSETVPR GQVGQLIVRG PQAMQGYWNN PFETQKKLKA GWIYTGDLFS QDRDGFYYFH GRADDMIVSG GENIHPREVE EILYRCPGVQ EVAVVGLADE KWGQAVTAFV VRSDPALSAQ DLDAFCKASD ALAPYKRPRR YEFLESLPLN PSGKVLRREL VARHAPQPAC
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