Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4885 |
Symbol | |
ID | 4583446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 388791 |
End bp | 389441 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639772188 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_918641 |
Protein GI | 119387607 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.694048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATAT TTGGTTTCAT TGCGAATAAC TGGCCGGTCA TCCTGCGTCT GGCGGGCGAG CACATCTCGA TCGTCGCCGT GGCTGTGGGG TTGGCGATCC TGACCGGCGT GCCCATCGGC ATCGCCATCA CCCAGAACCG GCGCGTCGCG GACGGGGTGC TTTATGTGGC CTCGATCATC GTCACGATCC CCTCGATCGC GCTTTTCGGC CTGATGATCC CGATCCTGTC CAAGATCGGC CAGGGGATCG GCTGGCTGCC CGCGGTGATC GCGATCCTGC TCTATTCGCA GCTGCCCATC GTGCGCAACA CCTATACCGC CATCACCAAT GTCGATCCCG CGCTGCGCGA GGCGGCCATC GGCATGGGCA TGACGCCTTT CCAGCGGCTG ACCCGGCTCG AAATCCCCAT CGCGATCCCG GTCATCATGG CCGGCGTGCG GACCGCCGTG GTCATGAATA TCGGCGTCGC GGCGATCGCC GCCTATATCG GCGCCGGCGG TCTGGGCGTG CTGATCGCGC GCGGCATTTC GCAGACCGAT CCGCGCCAGC TGATCACCGG CGCGCTGGCC GTCTCTCTTC TCGCCATCTT GGCCGACTGG GCGCTTTTGC AATTGCAGAA GCGGCTGACC CCGGCCGGGC TGAAACGCTG A
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Protein sequence | MEIFGFIANN WPVILRLAGE HISIVAVAVG LAILTGVPIG IAITQNRRVA DGVLYVASII VTIPSIALFG LMIPILSKIG QGIGWLPAVI AILLYSQLPI VRNTYTAITN VDPALREAAI GMGMTPFQRL TRLEIPIAIP VIMAGVRTAV VMNIGVAAIA AYIGAGGLGV LIARGISQTD PRQLITGALA VSLLAILADW ALLQLQKRLT PAGLKR
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