Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4857 |
Symbol | |
ID | 4583418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 359934 |
End bp | 361199 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639772160 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_918613 |
Protein GI | 119387579 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.454998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCT CAACCGCCTT TCTGGTCGTG ATGCTGGTGG GCGTGCCCAT CGGCCTGTGC CTCTGCGTCG CGGCCATCGT CTATGTGCTG GCCAGCGGCA ACATGGTGCT GTTCCAAAGC TATCCCTTGC AGATGTTCAA CGCGGTGGAC AGCTATGGCC TGATCGCCAT CCCGCTGTTC GTCCTGATCG GAGAGATCAT GAACGCGGGC GGCATCACCA AGAAGATCGT CGACATGGCC ATGGCCTTCG TCGGCTCGCT GCGCGGCGGG CTGGCCTATG TCAACGCCAT CGCGAACATG TTCGTGGCCT CGATCCTCGG CTCCGCCACG GCGCAGGTGG CGATCATGTC GCAGATCATG GTCCCCGAGA TGGAGAAAAA GGGCTACGAC AAGGACTTCT CTGCCGGGCT GACCGCCTAT GGCGGGATGC TGGGGTCGAT CATGCCGCCC TCGGTCATGT TCGTGGTCTA CAGCGTCATG GCGCAGGTCT CGGTATCGGA CATGCTGATG GCGGGGCTGG TGCCGGGGCT GATCCTGACC GCGCTGTTCT GCGTGGTGAT CGCCATCATC GGCCATTGCC AGAAATTCCC GCGCAGCGAG CCGCAGACGT TCAAGCAGCG CGCCGCCACG GTCTGGGCGG CGGTACCGTC GCTGTCGATC CCCATCGTCA TCGTCGGCTC GATCTTTTCG GGTCTTGCCA GCGCGACCGA GGCCGGTGCC GTCGGCGCGG TGATGTCGCT GCTCATCGGC CGCTTCTGGA CGAGGCGGCT GCGTTTCTCG GACATGCCGG CGATCATGAC CCGGGCGGGG CTTTACTCGG CCATCGTGCT GTTCCTGGTC GTGGCGGCGG GGGTGCTGTC CTGGATCCTC GTGTTCGGGC GCGTCCCGCA AGAGGTCGCC GGCTGGATCC AGACCGTGGC CAAGGACCCG GTCACCTTCA TGCTGCTGGC CAACGTGATC CTGCTGGTGA TCGGCACGGT GATCGACGGC ATTCCCGGCC TGATCATGAC GGTTCCGATC CTGCTGCCGA TCGCCACCGA GGTCTATGGC ATCGACCCGC ATCATTTCGG CGTCGTCGTG GTGATCAACC TGGTGCTGGG GCTGCTGTCG CCGCCGGTCG GCCTGTGCTT CTTCGTCGCC GCCGCCGCGA CGGGGGCCAA TCCCGGGCGG ATGTTCATGG TGACCATGCC GTTCTTCCTG ATCACCTGCG TCCTTCTGGT GATCCTGTCG GTGTTCCCGA CCATCTCGCT GATCTTCATC GGATAA
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Protein sequence | MLTSTAFLVV MLVGVPIGLC LCVAAIVYVL ASGNMVLFQS YPLQMFNAVD SYGLIAIPLF VLIGEIMNAG GITKKIVDMA MAFVGSLRGG LAYVNAIANM FVASILGSAT AQVAIMSQIM VPEMEKKGYD KDFSAGLTAY GGMLGSIMPP SVMFVVYSVM AQVSVSDMLM AGLVPGLILT ALFCVVIAII GHCQKFPRSE PQTFKQRAAT VWAAVPSLSI PIVIVGSIFS GLASATEAGA VGAVMSLLIG RFWTRRLRFS DMPAIMTRAG LYSAIVLFLV VAAGVLSWIL VFGRVPQEVA GWIQTVAKDP VTFMLLANVI LLVIGTVIDG IPGLIMTVPI LLPIATEVYG IDPHHFGVVV VINLVLGLLS PPVGLCFFVA AAATGANPGR MFMVTMPFFL ITCVLLVILS VFPTISLIFI G
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