| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4852 |
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| Symbol | |
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| ID | 4583413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 352963 |
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| End bp | 355263 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772155 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_918608 |
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| Protein GI | 119387574 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily
[COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.771827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCG GGCGACCAGC AAGGTCCCTG CTGCTGCTGG CGGCGGCGGT ATCGCTGGGC
CTGACGACAC TGGCCGAGGC CGAAGGCGCC CGCATCGCGC TGGTCGTCGG CAACGGGAAT
TACCAGCGTA TCCCGGCCCT GGACAACGCC GTGCGCGACG CCCGCGACAT CGCCGACATG
CTGCGCGACT TCGGCTTTAC CGTGCAGGAG TCCCACGACC TTGACAGGGC GGGTTTCGAA
ACCTTCCTGC GCACGGCGCT GCTGAACATT CCCGAAGGAT CGGAGCTGGT CTTTTTCTAT
GCGGGCCACG GCATCCAGAT CGGGCGCCGG AACTATCTGC TGCCGACCGA TGTGGCCTTT
GAAAGCGTCT ATGACCTGCC GGTGCAGTCC ATCACCCTGG ACCGGGTGGT CGAGTTGCTT
TCGGCCCGCG GCTCAAGCCA TGTCGCCATG ATCGACGCTT GCCGCGAAAA TCCGTTTCCG
AACCTGCGCC TGGCGGCAAA CCTTGATGCG ACGCTGTTCG AGGCCAAGTC CGGCTTCGAG
GTCTTTTCGA CCCCCATCAA CTCGCTGGTC GCCTTTTCGA CCTCGCCCGG GCAGGTGGCC
TATGACGGCG AAGCGGGCGG AAACGGGCCC TATACGCAGG CGATCCTGGC CTCGGCAGGG
CAATATTCGG ATGAGAATAT CCTGACGATG CTGGCCGATG TGCGCCAGCG TGTCTACCAA
TCGACCAGCG GCCGCCAGGT GCCTTGGGAA AGCTCGACCC TGGTGCAGCC CTTCTATCTG
GTCCAGGGCG GGGCGGTTTC CACTCCGGCC CCCTCGGATT CCACGACCTC CCAGCCCAAC
CGCAGCGCAG CGCCGGTGCA GGAAATTGCG GTCGATCTGG CGATGCCCTT CGCGCGCGAA
CTGCCGCTGG ACGACAGGCT TGCCGGGCAG ATCGGCGGGT TTCAGGGCGA TGTCTCGGTG
ATCGAGGCCC CGCAGCATGG GCAGCTGGAT CTTGCCGGCG GTGCCCTGAC CTATCGCCCG
CACCTGGCCG AGACCTCGAT GGCGGGCAAG ACGGAATATG CCGTCCGCGA CCGCTTCGGC
CTTGGCATCG GCGGGGCGGA GCCGCGCATC CTGAACGTCT CGGTCGAGAT GACGGCCCTG
GCCTGCGACG TCCAGGCGGG CGATGCGCTG GATCTTCAGG GCGTGGGCCT TTACCGGCTG
CCGAACCAGA TCGAACCCCG GCGCGCATTG GCCGATTGCA CGCAGGCCGT GACCGAAAAT
CCCGGCATTG CGCGGCTGCT CTACCAGCTG GGCCGCGCCC AGCAGGCTTC GGGCGACCTG
AAATCGGCCT ATGACAGTTT TCGCGCCGCC GCCGCGGCCG GCCATATCCG CGCCGGTCAT
GCGGCCGCCA TGCTGCTGCT CAGCCCACGC GTGGACCGCG CTGCGGTGCC CATTCCGCTG
GACGAGGCGC AGGGCAATGC GCTTCTGGAC CAGGCCATCG CCAGCGGCGA CCCCTTCGCC
ATGCATAGCC GCGGCCTGCG ATTGCTGCGC AACGGACCTG CGGAGGACGA TCGCCAGCGC
GGCTTCGAAT TGCTCGAGCG CGCGGCCGAG CTTGGCCATA CCTATTCCAT GAACGAGTTG
GGCGCCTATT TCCTTGATCC CGACAGCCGT TGGTTCCGGC CGGAACGCGG GCTGACCTAT
CTGCGCGCCT CGGCCGAGCG CAAGGATATC TATGGCTACA ACAACCTGGG GCTGGTGGCG
CTGCGCGGCT ATGAGGATGT GAAGCCGGAC CATGCCGCCG CCCGGGACTG GTTCGAGCGT
GCGGCCCAGG GCGGGCATCC CTTTGCGCCT TCGAATCTGG GGCGGATGAT CATGCGCGGC
CAGTTGGGCA AGCCCGATCC GCGTGCGGCG GTGCGCTGGT ATGACATGGG GCTGGCGCGC
GGCGACGGCT GGGGCGGCGC CAATGCCGCC GGTATCATCC TGAAGGGCGA TGCCCGGCCC
TTGGGCCCTG CCGATGCCGC CCTGCGCGCC GCCAAGGCGC TGTATCTGCC GGCGCCCGAC
GCGGCCGGCC GGGCGCGTGA ACTGCTGGAC GGGATTGCCG CCGCCGATCT GGACCGGGCC
ACGCAGATGA TCCTGAACGA GTTGGGCGAA GCGGTCGCCG TGGACGGGCG GGCCGGTCCC
GCCACCATCG AGGCGCTGGT CCGGGCCGGC AATCGGGCAG GGCTGGGGGC ACTGCCTGCC
GATGCGGGGG CGCAAGAGCG CCTGCTGATG GGGGCCCGGG CCTGGTGGGT GCAAAACCCG
CCGCGCGTCG ATCTGTTCTG A
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| Protein sequence | MSVGRPARSL LLLAAAVSLG LTTLAEAEGA RIALVVGNGN YQRIPALDNA VRDARDIADM
LRDFGFTVQE SHDLDRAGFE TFLRTALLNI PEGSELVFFY AGHGIQIGRR NYLLPTDVAF
ESVYDLPVQS ITLDRVVELL SARGSSHVAM IDACRENPFP NLRLAANLDA TLFEAKSGFE
VFSTPINSLV AFSTSPGQVA YDGEAGGNGP YTQAILASAG QYSDENILTM LADVRQRVYQ
STSGRQVPWE SSTLVQPFYL VQGGAVSTPA PSDSTTSQPN RSAAPVQEIA VDLAMPFARE
LPLDDRLAGQ IGGFQGDVSV IEAPQHGQLD LAGGALTYRP HLAETSMAGK TEYAVRDRFG
LGIGGAEPRI LNVSVEMTAL ACDVQAGDAL DLQGVGLYRL PNQIEPRRAL ADCTQAVTEN
PGIARLLYQL GRAQQASGDL KSAYDSFRAA AAAGHIRAGH AAAMLLLSPR VDRAAVPIPL
DEAQGNALLD QAIASGDPFA MHSRGLRLLR NGPAEDDRQR GFELLERAAE LGHTYSMNEL
GAYFLDPDSR WFRPERGLTY LRASAERKDI YGYNNLGLVA LRGYEDVKPD HAAARDWFER
AAQGGHPFAP SNLGRMIMRG QLGKPDPRAA VRWYDMGLAR GDGWGGANAA GIILKGDARP
LGPADAALRA AKALYLPAPD AAGRARELLD GIAAADLDRA TQMILNELGE AVAVDGRAGP
ATIEALVRAG NRAGLGALPA DAGAQERLLM GARAWWVQNP PRVDLF
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